Detailed information of deep learning profile BP000476.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000476.1
Cell line/tissue: A549
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000DYG
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 0.00 0.02 0.00 0.01 0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.04 0.00 0.04 -0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.03 0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 299 248 268 230 292 262 263 286 251 233 261 276 324 269 291 238 243 260 344 423 80 0 1214 0 1238 1 0 115 89 207 268 222 271 248 255 258 287 259 278 236 304 302 348 312 288 289 284 288 273 250 ]
C [ 342 371 375 357 353 338 353 314 321 387 399 399 320 327 327 377 422 376 250 109 365 1243 0 1242 4 1 0 316 572 500 334 369 352 366 386 343 326 302 354 419 355 365 347 345 347 354 326 350 347 364 ]
G [ 308 325 334 336 342 311 300 336 434 348 314 310 339 361 335 393 329 331 473 614 525 0 18 0 1 0 1243 651 171 269 352 364 373 367 335 324 341 412 356 340 324 334 316 322 363 365 385 353 346 342 ]
T [ 294 299 266 320 256 332 327 307 237 275 269 258 260 286 290 235 249 276 176 97 273 0 11 1 0 1241 0 161 411 267 289 288 247 262 267 318 289 270 255 248 260 242 232 264 245 235 248 252 277 287 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 -0.00 -0.01 0.02 -0.03 0.01 -0.01 -0.02 -0.01 -0.01 -0.00 -0.00 ]
C [ 0.01 0.01 -0.00 0.00 0.04 -0.03 0.04 -0.03 0.01 -0.02 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.02 0.02 -0.03 0.05 -0.03 0.04 0.00 0.00 0.01 0.00 ]
T [ -0.00 -0.00 -0.01 -0.00 -0.02 -0.01 0.01 -0.04 0.03 -0.01 -0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 5582

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1313

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 313

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000479.1 MAX ENCSR000EDS HepG2 Homo sapiens MA0058.4
BP000480.1 MAX ENCSR000EEZ endothelial cell of umbilical vein Homo sapiens MA0058.4
BP000481.1 MAX ENCSR000EFV K562 Homo sapiens MA0058.4
BP000482.1 MAX ENCSR000EHS NB4 Homo sapiens MA0058.4
BP000483.1 MAX ENCSR000EUP H1 Homo sapiens MA0058.4
BP000484.1 MAX ENCSR000EZF HeLa-S3 Homo sapiens MA0058.4
BP000485.1 MAX ENCSR000FAE K562 Homo sapiens MA0058.4
BP000486.1 MAX ENCSR158LJN K562 Homo sapiens MA0058.4
BP000487.1 MAX ENCSR168DYA HepG2 Homo sapiens MA0058.4
BP000488.1 MAX ENCSR349FYX WTC11 Homo sapiens MA0058.4
Showing 10 profiles of page 2 from 3 pages