Detailed information of deep learning profile BP000476.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000476.1
Cell line/tissue: A549
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000DYG
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 0.00 0.03 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.00 -0.00 0.04 0.00 0.04 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.01 0.00 0.02 0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 287 277 252 248 235 245 264 232 242 260 248 255 270 289 318 267 262 247 288 289 267 411 161 0 1241 0 1 11 0 273 97 176 276 249 235 290 286 260 258 269 275 237 307 327 332 256 320 266 299 294 ]
C [ 342 346 353 385 365 363 322 316 334 324 340 356 412 341 324 335 367 373 364 352 269 171 651 1243 0 1 0 18 0 525 614 473 331 329 393 335 361 339 310 314 348 434 336 300 311 342 336 334 325 308 ]
G [ 364 347 350 326 354 347 345 347 365 355 419 354 302 326 343 386 366 352 369 334 500 572 316 0 1 4 1242 0 1243 365 109 250 376 422 377 327 327 320 399 399 387 321 314 353 338 353 357 375 371 342 ]
T [ 250 273 288 284 289 288 312 348 302 304 236 278 259 287 258 255 248 271 222 268 207 89 115 0 1 1238 0 1214 0 80 423 344 260 243 238 291 269 324 276 261 233 251 286 263 262 292 230 268 248 299 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 -0.00 -0.01 0.03 -0.04 0.01 -0.01 -0.02 -0.00 -0.01 -0.00 -0.00 ]
C [ 0.00 0.01 0.00 0.00 0.04 -0.03 0.05 -0.03 0.02 -0.02 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.02 0.01 -0.03 0.04 -0.03 0.04 0.00 -0.00 0.01 0.01 ]
T [ -0.00 -0.00 -0.01 -0.01 -0.02 -0.01 0.01 -0.03 0.02 -0.01 -0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 5582

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1313

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 313

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000468.1 MAX ENCSR000BLP K562 Homo sapiens MA0058.4
BP000469.1 MAX ENCSR000BSH HCT116 Homo sapiens MA0058.4
BP000470.1 MAX ENCSR000BSJ H1 Homo sapiens MA0058.4
BP000471.1 MAX ENCSR000BTJ A549 Homo sapiens MA0058.4
BP000472.1 MAX ENCSR000BTM HepG2 Homo sapiens MA0058.4
BP000473.1 MAX ENCSR000BTY Ishikawa Homo sapiens MA0058.4
BP000474.1 MAX ENCSR000BUL MCF-7 Homo sapiens MA0058.4
BP000475.1 MAX ENCSR000BVD SK-N-SH Homo sapiens MA0058.4
BP000477.1 MAX ENCSR000DZF GM12878 Homo sapiens MA0058.4
BP000478.1 MAX ENCSR000ECN HeLa-S3 Homo sapiens MA0058.4
Showing 10 profiles of page 1 from 3 pages