Detailed information of deep learning profile BP000475.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000475.1
Cell line/tissue: SK-N-SH
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000BVD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.03 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.03 0.00 0.03 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.02 0.00 0.02 0.00 -0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 708 666 584 630 667 632 610 654 617 603 632 705 707 677 587 643 697 788 883 1025 518 6 2676 1 9 38 2 240 290 488 568 533 638 835 573 679 668 678 675 586 688 698 653 666 690 616 700 667 610 663 ]
C [ 699 692 706 694 676 697 699 641 705 686 752 651 659 710 734 726 727 619 451 350 1356 2672 0 1 2 18 1 1104 925 745 601 698 796 589 637 634 676 641 637 726 663 644 704 692 680 664 660 610 695 663 ]
G [ 659 682 717 673 665 663 689 696 706 695 638 657 683 689 670 723 699 699 778 1010 731 0 2 1 2667 0 2670 1012 236 435 776 822 680 692 710 669 660 732 711 715 672 702 685 663 671 723 679 667 694 701 ]
T [ 612 638 671 681 670 686 680 687 650 694 656 665 629 602 687 586 555 572 566 293 73 0 0 2675 0 2622 5 322 1227 1010 733 625 564 562 758 696 674 627 655 651 655 634 636 657 637 675 639 734 679 651 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 0.00 -0.00 0.02 -0.03 0.01 -0.01 -0.01 -0.00 -0.01 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.03 -0.03 0.04 -0.02 0.02 -0.01 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.01 0.01 0.01 -0.02 0.01 -0.03 0.03 -0.03 0.03 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 0.02 -0.02 0.02 -0.00 -0.00 0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 10349

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5146

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1583

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 285

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 271

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 189

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 66

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 38

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000479.1 MAX ENCSR000EDS HepG2 Homo sapiens MA0058.4
BP000480.1 MAX ENCSR000EEZ endothelial cell of umbilical vein Homo sapiens MA0058.4
BP000481.1 MAX ENCSR000EFV K562 Homo sapiens MA0058.4
BP000482.1 MAX ENCSR000EHS NB4 Homo sapiens MA0058.4
BP000483.1 MAX ENCSR000EUP H1 Homo sapiens MA0058.4
BP000484.1 MAX ENCSR000EZF HeLa-S3 Homo sapiens MA0058.4
BP000485.1 MAX ENCSR000FAE K562 Homo sapiens MA0058.4
BP000486.1 MAX ENCSR158LJN K562 Homo sapiens MA0058.4
BP000487.1 MAX ENCSR168DYA HepG2 Homo sapiens MA0058.4
BP000488.1 MAX ENCSR349FYX WTC11 Homo sapiens MA0058.4
Showing 10 profiles of page 2 from 3 pages