Detailed information of deep learning profile BP000475.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000475.1
Cell line/tissue: SK-N-SH
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000BVD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 -0.00 0.00 0.02 0.00 0.02 0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.03 0.00 0.03 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.03 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 651 679 734 639 675 637 657 636 634 655 651 655 627 674 696 758 562 564 625 733 1010 1227 322 5 2622 0 2675 0 0 73 293 566 572 555 586 687 602 629 665 656 694 650 687 680 686 670 681 671 638 612 ]
C [ 701 694 667 679 723 671 663 685 702 672 715 711 732 660 669 710 692 680 822 776 435 236 1012 2670 0 2667 1 2 0 731 1010 778 699 699 723 670 689 683 657 638 695 706 696 689 663 665 673 717 682 659 ]
G [ 663 695 610 660 664 680 692 704 644 663 726 637 641 676 634 637 589 796 698 601 745 925 1104 1 18 2 1 0 2672 1356 350 451 619 727 726 734 710 659 651 752 686 705 641 699 697 676 694 706 692 699 ]
T [ 663 610 667 700 616 690 666 653 698 688 586 675 678 668 679 573 835 638 533 568 488 290 240 2 38 9 1 2676 6 518 1025 883 788 697 643 587 677 707 705 632 603 617 654 610 632 667 630 584 666 708 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.00 -0.00 -0.00 0.02 -0.02 0.02 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 0.03 -0.03 0.03 -0.03 0.01 -0.02 0.01 0.01 0.01 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.01 0.02 -0.02 0.04 -0.03 0.03 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.01 -0.00 -0.01 -0.01 0.01 -0.03 0.02 -0.00 0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 10349

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5146

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1583

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 285

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 271

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 189

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 66

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 38

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000468.1 MAX ENCSR000BLP K562 Homo sapiens MA0058.4
BP000469.1 MAX ENCSR000BSH HCT116 Homo sapiens MA0058.4
BP000470.1 MAX ENCSR000BSJ H1 Homo sapiens MA0058.4
BP000471.1 MAX ENCSR000BTJ A549 Homo sapiens MA0058.4
BP000472.1 MAX ENCSR000BTM HepG2 Homo sapiens MA0058.4
BP000473.1 MAX ENCSR000BTY Ishikawa Homo sapiens MA0058.4
BP000474.1 MAX ENCSR000BUL MCF-7 Homo sapiens MA0058.4
BP000476.1 MAX ENCSR000DYG A549 Homo sapiens MA0058.4
BP000477.1 MAX ENCSR000DZF GM12878 Homo sapiens MA0058.4
BP000478.1 MAX ENCSR000ECN HeLa-S3 Homo sapiens MA0058.4
Showing 10 profiles of page 1 from 3 pages