Detailed information of deep learning profile BP000474.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000474.1
Cell line/tissue: MCF-7
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000BUL
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 -0.00 0.03 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.05 0.00 0.04 0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.05 0.00 0.04 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.02 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2571 2544 2523 2595 2500 2447 2449 2334 2557 2566 2482 2466 2544 2349 2444 2448 2336 2420 2442 2592 3060 3809 1768 5 11980 2 105 946 29 1421 1590 2190 2281 2069 2323 2539 2397 2456 2473 2504 2542 2359 2552 2551 2558 2503 2528 2459 2586 2478 ]
C [ 3655 3679 3563 3571 3589 3610 3517 3689 3434 3524 3578 3638 3553 3727 3745 3497 3901 3723 3865 3657 2985 2440 3934 12199 8 8250 14 2246 157 2668 5348 4000 3361 3725 3571 3555 3698 3473 3454 3441 3472 3782 3605 3516 3485 3564 3548 3622 3498 3566 ]
G [ 3473 3526 3683 3556 3658 3630 3678 3557 3712 3683 3805 3656 3566 3713 3555 3930 3515 3729 3824 3753 4212 4307 5345 7 173 62 12092 22 11564 6798 2156 3017 4058 3935 4067 3823 3735 3862 3932 3836 3855 3600 3707 3593 3760 3666 3681 3614 3647 3638 ]
T [ 2512 2462 2442 2489 2464 2524 2567 2631 2508 2438 2346 2451 2548 2422 2467 2336 2459 2339 2080 2209 1954 1655 1164 0 50 3897 0 8997 461 1324 3117 3004 2511 2482 2250 2294 2381 2420 2352 2430 2342 2470 2347 2551 2408 2478 2454 2516 2480 2529 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 -0.00 -0.01 0.03 -0.04 0.01 -0.01 -0.03 -0.01 -0.01 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.01 0.05 -0.03 0.05 -0.02 0.02 -0.02 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 -0.03 0.02 -0.02 0.05 -0.03 0.04 0.01 0.00 0.01 0.01 ]
T [ -0.00 -0.00 -0.01 -0.01 -0.02 -0.02 0.01 -0.04 0.03 -0.00 -0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3054

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3016

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1726

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1110

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 468

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 396

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 321

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 132

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 92

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 20

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000479.1 MAX ENCSR000EDS HepG2 Homo sapiens MA0058.4
BP000480.1 MAX ENCSR000EEZ endothelial cell of umbilical vein Homo sapiens MA0058.4
BP000481.1 MAX ENCSR000EFV K562 Homo sapiens MA0058.4
BP000482.1 MAX ENCSR000EHS NB4 Homo sapiens MA0058.4
BP000483.1 MAX ENCSR000EUP H1 Homo sapiens MA0058.4
BP000484.1 MAX ENCSR000EZF HeLa-S3 Homo sapiens MA0058.4
BP000485.1 MAX ENCSR000FAE K562 Homo sapiens MA0058.4
BP000486.1 MAX ENCSR158LJN K562 Homo sapiens MA0058.4
BP000487.1 MAX ENCSR168DYA HepG2 Homo sapiens MA0058.4
BP000488.1 MAX ENCSR349FYX WTC11 Homo sapiens MA0058.4
Showing 10 profiles of page 2 from 3 pages