Detailed information of deep learning profile BP000474.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000474.1
Cell line/tissue: MCF-7
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000BUL
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.02 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 0.04 0.00 0.05 0.00 0.00 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.04 0.00 0.05 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.03 -0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2529 2480 2516 2454 2478 2408 2551 2347 2470 2342 2430 2352 2420 2381 2294 2250 2482 2511 3004 3117 1324 461 8997 0 3897 50 0 1164 1655 1954 2209 2080 2339 2459 2336 2467 2422 2548 2451 2346 2438 2508 2631 2567 2524 2464 2489 2442 2462 2512 ]
C [ 3638 3647 3614 3681 3666 3760 3593 3707 3600 3855 3836 3932 3862 3735 3823 4067 3935 4058 3017 2156 6798 11564 22 12092 62 173 7 5345 4307 4212 3753 3824 3729 3515 3930 3555 3713 3566 3656 3805 3683 3712 3557 3678 3630 3658 3556 3683 3526 3473 ]
G [ 3566 3498 3622 3548 3564 3485 3516 3605 3782 3472 3441 3454 3473 3698 3555 3571 3725 3361 4000 5348 2668 157 2246 14 8250 8 12199 3934 2440 2985 3657 3865 3723 3901 3497 3745 3727 3553 3638 3578 3524 3434 3689 3517 3610 3589 3571 3563 3679 3655 ]
T [ 2478 2586 2459 2528 2503 2558 2551 2552 2359 2542 2504 2473 2456 2397 2539 2323 2069 2281 2190 1590 1421 29 946 105 2 11980 5 1768 3809 3060 2592 2442 2420 2336 2448 2444 2349 2544 2466 2482 2566 2557 2334 2449 2447 2500 2595 2523 2544 2571 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.03 -0.04 0.01 -0.02 -0.02 -0.01 -0.01 -0.00 -0.00 ]
C [ 0.01 0.01 0.00 0.01 0.04 -0.03 0.05 -0.02 0.02 -0.03 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 -0.02 0.02 -0.02 0.05 -0.03 0.05 0.01 0.01 0.01 0.01 ]
T [ -0.00 -0.00 -0.01 -0.01 -0.03 -0.01 0.01 -0.04 0.03 -0.01 -0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3054

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3016

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1726

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1110

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 468

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 396

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 321

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 132

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 92

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 20

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000468.1 MAX ENCSR000BLP K562 Homo sapiens MA0058.4
BP000469.1 MAX ENCSR000BSH HCT116 Homo sapiens MA0058.4
BP000470.1 MAX ENCSR000BSJ H1 Homo sapiens MA0058.4
BP000471.1 MAX ENCSR000BTJ A549 Homo sapiens MA0058.4
BP000472.1 MAX ENCSR000BTM HepG2 Homo sapiens MA0058.4
BP000473.1 MAX ENCSR000BTY Ishikawa Homo sapiens MA0058.4
BP000475.1 MAX ENCSR000BVD SK-N-SH Homo sapiens MA0058.4
BP000476.1 MAX ENCSR000DYG A549 Homo sapiens MA0058.4
BP000477.1 MAX ENCSR000DZF GM12878 Homo sapiens MA0058.4
BP000478.1 MAX ENCSR000ECN HeLa-S3 Homo sapiens MA0058.4
Showing 10 profiles of page 1 from 3 pages