Detailed information of deep learning profile BP000472.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000472.1
Cell line/tissue: HepG2
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000BTM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.02 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.03 -0.00 0.04 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.04 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.03 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2173 2155 2171 2089 2159 2137 2109 2057 2193 2062 2061 2106 2074 1976 2255 2122 2429 2314 1302 721 6681 1 124 134 4 1302 1910 1543 2143 1808 1998 2038 2063 1980 1996 2177 2159 1959 2072 2051 2160 2195 2066 2097 2188 2141 2173 2166 2059 2065 ]
C [ 3531 3696 3602 3654 3519 3535 3540 3795 3608 3886 3631 3900 3650 3870 3551 3937 3210 2496 7288 10504 17 11415 2 117 7 5407 3342 4239 3712 3827 3680 3262 3984 3304 3836 3444 3569 3694 3601 3668 3594 3592 3605 3721 3499 3648 3522 3539 3551 3598 ]
G [ 3593 3521 3455 3447 3619 3606 3745 3443 3498 3354 3709 3375 3591 3527 3692 3421 3862 4990 1817 155 3390 2 11312 11 11395 2991 2808 3166 3509 3616 3687 4094 3253 4049 3465 3654 3615 3539 3596 3565 3692 3505 3588 3454 3485 3476 3636 3452 3623 3596 ]
T [ 2142 2067 2211 2249 2142 2161 2045 2144 2140 2137 2038 2058 2124 2066 1941 1959 1938 1639 1032 59 1351 21 1 11177 33 1739 3379 2491 2075 2188 2074 2045 2139 2106 2142 2164 2096 2247 2170 2155 1993 2147 2180 2167 2267 2174 2108 2282 2206 2180 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.02 -0.04 0.01 -0.01 -0.02 -0.01 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 0.03 -0.03 0.04 -0.02 0.02 -0.03 0.01 0.01 0.01 0.00 ]
G [ 0.00 0.01 0.01 0.01 -0.02 0.02 -0.03 0.04 -0.03 0.04 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.01 -0.02 -0.01 0.01 -0.04 0.03 -0.00 0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 6013

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3282

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1923

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1080

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 479

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 403

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 74

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000479.1 MAX ENCSR000EDS HepG2 Homo sapiens MA0058.4
BP000480.1 MAX ENCSR000EEZ endothelial cell of umbilical vein Homo sapiens MA0058.4
BP000481.1 MAX ENCSR000EFV K562 Homo sapiens MA0058.4
BP000482.1 MAX ENCSR000EHS NB4 Homo sapiens MA0058.4
BP000483.1 MAX ENCSR000EUP H1 Homo sapiens MA0058.4
BP000484.1 MAX ENCSR000EZF HeLa-S3 Homo sapiens MA0058.4
BP000485.1 MAX ENCSR000FAE K562 Homo sapiens MA0058.4
BP000486.1 MAX ENCSR158LJN K562 Homo sapiens MA0058.4
BP000487.1 MAX ENCSR168DYA HepG2 Homo sapiens MA0058.4
BP000488.1 MAX ENCSR349FYX WTC11 Homo sapiens MA0058.4
Showing 10 profiles of page 2 from 3 pages