Detailed information of deep learning profile BP000472.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000472.1
Cell line/tissue: HepG2
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000BTM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.03 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.04 0.00 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.04 -0.00 0.03 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.02 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2180 2206 2282 2108 2174 2267 2167 2180 2147 1993 2155 2170 2247 2096 2164 2142 2106 2139 2045 2074 2188 2075 2491 3379 1739 33 11177 1 21 1351 59 1032 1639 1938 1959 1941 2066 2124 2058 2038 2137 2140 2144 2045 2161 2142 2249 2211 2067 2142 ]
C [ 3596 3623 3452 3636 3476 3485 3454 3588 3505 3692 3565 3596 3539 3615 3654 3465 4049 3253 4094 3687 3616 3509 3166 2808 2991 11395 11 11312 2 3390 155 1817 4990 3862 3421 3692 3527 3591 3375 3709 3354 3498 3443 3745 3606 3619 3447 3455 3521 3593 ]
G [ 3598 3551 3539 3522 3648 3499 3721 3605 3592 3594 3668 3601 3694 3569 3444 3836 3304 3984 3262 3680 3827 3712 4239 3342 5407 7 117 2 11415 17 10504 7288 2496 3210 3937 3551 3870 3650 3900 3631 3886 3608 3795 3540 3535 3519 3654 3602 3696 3531 ]
T [ 2065 2059 2166 2173 2141 2188 2097 2066 2195 2160 2051 2072 1959 2159 2177 1996 1980 2063 2038 1998 1808 2143 1543 1910 1302 4 134 124 1 6681 721 1302 2314 2429 2122 2255 1976 2074 2106 2061 2062 2193 2057 2109 2137 2159 2089 2171 2155 2173 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 0.00 -0.00 0.03 -0.04 0.01 -0.01 -0.02 -0.01 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 0.04 -0.03 0.04 -0.03 0.02 -0.02 0.01 0.01 0.01 0.00 ]
G [ 0.00 0.01 0.01 0.01 -0.03 0.02 -0.02 0.04 -0.03 0.03 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.01 -0.02 -0.01 0.01 -0.04 0.02 -0.00 -0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 6013

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3282

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1923

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1080

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 479

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 403

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 74

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000468.1 MAX ENCSR000BLP K562 Homo sapiens MA0058.4
BP000469.1 MAX ENCSR000BSH HCT116 Homo sapiens MA0058.4
BP000470.1 MAX ENCSR000BSJ H1 Homo sapiens MA0058.4
BP000471.1 MAX ENCSR000BTJ A549 Homo sapiens MA0058.4
BP000473.1 MAX ENCSR000BTY Ishikawa Homo sapiens MA0058.4
BP000474.1 MAX ENCSR000BUL MCF-7 Homo sapiens MA0058.4
BP000475.1 MAX ENCSR000BVD SK-N-SH Homo sapiens MA0058.4
BP000476.1 MAX ENCSR000DYG A549 Homo sapiens MA0058.4
BP000477.1 MAX ENCSR000DZF GM12878 Homo sapiens MA0058.4
BP000478.1 MAX ENCSR000ECN HeLa-S3 Homo sapiens MA0058.4
Showing 10 profiles of page 1 from 3 pages