Detailed information of deep learning profile BP000469.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000469.1
Cell line/tissue: HCT116
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000BSH
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.01 -0.00 0.00 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.02 0.00 0.03 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 753 838 822 773 780 774 773 762 806 827 758 762 742 857 821 781 754 782 813 1171 1285 369 79 3120 0 3339 1 0 152 359 748 752 765 825 769 818 792 786 752 871 774 842 805 923 864 838 768 787 784 781 ]
C [ 922 931 856 906 905 920 930 912 924 880 943 956 971 890 907 906 964 1068 966 571 252 1133 3259 2 3364 19 5 1 1105 1272 991 925 918 823 967 894 872 894 884 872 922 895 881 869 933 846 920 883 911 902 ]
G [ 874 824 887 928 872 910 827 851 872 902 862 868 926 834 880 811 925 869 833 945 1503 1431 19 176 0 4 0 3363 1574 451 706 803 942 931 944 863 898 888 922 882 872 880 892 865 840 920 915 906 903 875 ]
T [ 816 772 800 758 808 761 835 840 763 756 802 779 726 784 757 867 722 646 753 678 325 432 8 67 1 3 3359 1 534 1283 920 885 740 786 685 790 803 797 807 740 797 748 787 708 728 761 762 789 767 807 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.01 0.00 -0.00 0.02 -0.03 0.01 -0.01 -0.01 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.02 -0.02 0.03 -0.02 0.01 -0.01 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.01 0.01 -0.01 0.03 -0.02 0.03 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 -0.00 -0.00 -0.01 -0.01 0.01 -0.03 0.02 -0.00 0.00 0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 5851

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5762

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 714

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 618

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 204

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 56

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 20

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000468.1 MAX ENCSR000BLP K562 Homo sapiens MA0058.4
BP000470.1 MAX ENCSR000BSJ H1 Homo sapiens MA0058.4
BP000471.1 MAX ENCSR000BTJ A549 Homo sapiens MA0058.4
BP000472.1 MAX ENCSR000BTM HepG2 Homo sapiens MA0058.4
BP000473.1 MAX ENCSR000BTY Ishikawa Homo sapiens MA0058.4
BP000474.1 MAX ENCSR000BUL MCF-7 Homo sapiens MA0058.4
BP000475.1 MAX ENCSR000BVD SK-N-SH Homo sapiens MA0058.4
BP000476.1 MAX ENCSR000DYG A549 Homo sapiens MA0058.4
BP000477.1 MAX ENCSR000DZF GM12878 Homo sapiens MA0058.4
BP000478.1 MAX ENCSR000ECN HeLa-S3 Homo sapiens MA0058.4
Showing 10 profiles of page 1 from 3 pages