Detailed information of deep learning profile BP000469.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000469.1
Cell line/tissue: HCT116
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000BSH
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.03 0.00 0.02 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.01 0.00 0.02 0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 807 767 789 762 761 728 708 787 748 797 740 807 797 803 790 685 786 740 885 920 1283 534 1 3359 3 1 67 8 432 325 678 753 646 722 867 757 784 726 779 802 756 763 840 835 761 808 758 800 772 816 ]
C [ 875 903 906 915 920 840 865 892 880 872 882 922 888 898 863 944 931 942 803 706 451 1574 3363 0 4 0 176 19 1431 1503 945 833 869 925 811 880 834 926 868 862 902 872 851 827 910 872 928 887 824 874 ]
G [ 902 911 883 920 846 933 869 881 895 922 872 884 894 872 894 967 823 918 925 991 1272 1105 1 5 19 3364 2 3259 1133 252 571 966 1068 964 906 907 890 971 956 943 880 924 912 930 920 905 906 856 931 922 ]
T [ 781 784 787 768 838 864 923 805 842 774 871 752 786 792 818 769 825 765 752 748 359 152 0 1 3339 0 3120 79 369 1285 1171 813 782 754 781 821 857 742 762 758 827 806 762 773 774 780 773 822 838 753 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.01 0.00 -0.00 0.02 -0.03 0.01 -0.01 -0.01 -0.00 -0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.03 -0.02 0.03 -0.01 0.01 -0.01 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.01 0.01 -0.02 0.03 -0.02 0.02 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 -0.01 -0.01 0.01 -0.03 0.02 -0.00 0.00 0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 5851

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5762

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 714

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 618

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 204

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 56

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 20

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000468.1 MAX ENCSR000BLP K562 Homo sapiens MA0058.4
BP000470.1 MAX ENCSR000BSJ H1 Homo sapiens MA0058.4
BP000471.1 MAX ENCSR000BTJ A549 Homo sapiens MA0058.4
BP000472.1 MAX ENCSR000BTM HepG2 Homo sapiens MA0058.4
BP000473.1 MAX ENCSR000BTY Ishikawa Homo sapiens MA0058.4
BP000474.1 MAX ENCSR000BUL MCF-7 Homo sapiens MA0058.4
BP000475.1 MAX ENCSR000BVD SK-N-SH Homo sapiens MA0058.4
BP000476.1 MAX ENCSR000DYG A549 Homo sapiens MA0058.4
BP000477.1 MAX ENCSR000DZF GM12878 Homo sapiens MA0058.4
BP000478.1 MAX ENCSR000ECN HeLa-S3 Homo sapiens MA0058.4
Showing 10 profiles of page 1 from 3 pages