Detailed information of deep learning profile BP001233.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF317 in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF317
Model ID: BP001233.1
Cell line/tissue: WTC11
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1593.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q96PQ6  
Source: ENCSR795KRU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.01 0.00 -0.00 0.02 -0.00 -0.00 0.00 0.03 -0.00 0.00 0.00 -0.00 -0.01 -0.00 0.09 -0.00 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.01 0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.15 -0.00 -0.00 0.09 0.00 -0.00 -0.00 0.06 -0.00 -0.00 0.01 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.07 0.00 0.00 0.00 0.02 -0.00 -0.00 0.00 0.07 -0.00 -0.00 0.10 -0.00 -0.00 0.00 0.00 -0.00 0.00 ]
T [ -0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.02 0.01 0.01 0.01 0.01 ]

Frequency matrix

       
A [ 1808 1758 1648 934 990 1696 1695 1266 1354 1127 925 1315 1989 542 1776 2363 387 2546 1132 725 1595 2811 16 2621 484 302 1635 233 3462 39 802 499 413 375 515 1927 752 523 1993 708 2199 2279 2153 583 1244 1596 476 1043 781 2163 ]
C [ 590 466 469 519 463 443 469 1044 779 1064 1471 774 344 502 696 387 129 152 818 185 209 88 3482 140 102 3058 339 41 23 2231 535 373 1894 575 1822 467 547 1776 396 366 429 342 492 1902 977 745 370 305 1109 426 ]
G [ 559 790 923 1612 1654 953 761 673 829 671 549 811 755 582 573 509 2902 568 653 670 1480 337 10 298 2903 57 264 3187 54 59 126 348 284 395 485 604 1079 536 696 2073 637 611 556 404 488 509 522 1721 1235 608 ]
T [ 638 581 555 530 488 503 670 612 633 733 650 695 507 1969 550 336 177 329 992 2015 311 359 87 536 106 178 1357 134 56 1266 2132 2375 1004 2250 773 597 1217 760 510 448 330 363 394 706 886 745 2227 526 470 398 ]

Hypothetical CWM

   
A [ -0.00 -0.02 0.02 0.01 -0.02 0.02 -0.00 -0.01 0.01 0.03 -0.04 0.00 0.01 -0.01 -0.01 -0.02 0.09 -0.05 0.01 0.00 -0.01 -0.01 -0.02 -0.00 -0.01 -0.01 -0.00 -0.01 -0.00 0.01 0.01 -0.02 -0.00 0.02 -0.02 -0.02 -0.01 -0.00 ]
C [ -0.00 0.01 -0.02 0.04 -0.01 -0.02 0.02 0.00 -0.03 -0.04 0.15 -0.01 -0.03 0.10 0.06 -0.05 -0.05 0.10 0.00 -0.01 0.03 0.03 0.03 0.01 0.02 0.03 0.01 0.01 0.02 0.00 0.01 0.04 -0.01 -0.01 0.01 -0.01 0.00 0.01 ]
G [ 0.02 0.02 0.01 0.00 0.08 0.03 0.02 0.03 0.07 -0.01 -0.06 0.04 0.08 -0.04 -0.01 0.11 -0.04 -0.04 0.00 0.02 0.00 0.01 0.02 0.02 0.01 0.02 0.02 0.03 0.02 0.02 0.01 -0.00 0.02 -0.01 -0.01 0.05 0.03 0.01 ]
T [ -0.00 0.01 -0.02 -0.03 -0.02 -0.02 0.00 0.00 -0.02 -0.00 -0.00 -0.00 -0.04 -0.01 0.01 -0.01 -0.05 0.04 0.01 0.01 0.02 0.01 0.00 -0.00 0.00 -0.00 -0.01 -0.01 -0.01 -0.02 -0.02 0.01 0.01 -0.01 0.04 -0.00 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1242

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 713

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 216

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 194

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 101

CWM

PFM

     

HCWM

2 profiles found for the same TF (ZNF317) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001232.1 ZNF317 ENCSR016OHL HepG2 Homo sapiens MA1593.2
BP001234.1 ZNF317 ENCSR976MXN K562 Homo sapiens MA1593.2
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