Detailed information of deep learning profile BP001232.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF317 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF317
Model ID: BP001232.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1593.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q96PQ6  
Source: ENCSR016OHL
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.01 0.01 0.01 0.01 0.01 -0.00 -0.00 0.01 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.01 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
C [ 0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.06 0.00 -0.00 0.04 0.00 0.00 -0.00 0.02 0.00 -0.00 0.00 0.04 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.01 -0.00 0.00 0.04 0.00 -0.00 0.00 0.05 -0.00 0.00 0.10 0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 ]
T [ -0.00 -0.00 0.00 0.00 -0.00 0.06 -0.00 -0.00 0.00 0.00 0.01 -0.00 0.02 0.00 -0.00 -0.00 0.02 -0.00 0.00 0.01 -0.00 0.00 ]

Frequency matrix

       
A [ 519 627 1531 637 815 741 462 473 444 503 630 703 1022 634 755 1553 1003 1680 1724 880 58 151 1482 229 133 604 27 293 323 1445 919 343 218 410 550 1361 577 629 617 682 661 662 664 536 593 593 583 575 642 805 ]
C [ 1068 1328 533 503 501 389 548 597 657 1382 586 526 652 477 554 451 282 399 92 47 32 2627 179 77 2350 174 2 306 1444 644 604 524 2238 492 544 609 748 741 601 625 625 586 739 675 1056 1077 774 704 582 547 ]
G [ 652 406 437 484 627 1279 516 401 435 451 460 1245 622 512 1181 573 1236 340 364 2071 23 45 312 2305 158 118 2997 112 159 217 568 138 169 476 397 429 344 556 931 685 700 925 471 458 464 489 512 519 572 905 ]
T [ 796 674 534 1411 1092 626 1509 1564 1499 699 1359 561 739 1412 545 458 514 616 855 37 2922 212 1062 424 394 2139 9 2324 1109 729 944 2030 410 1657 1544 636 1366 1109 886 1043 1049 862 1161 1366 922 876 1166 1237 1239 778 ]

Hypothetical CWM

   
A [ -0.00 0.01 0.03 -0.01 0.01 0.01 -0.01 -0.01 -0.01 0.00 0.00 -0.00 0.00 0.00 0.01 0.01 0.02 0.01 0.02 0.04 -0.03 0.00 0.02 -0.00 -0.02 0.01 0.00 -0.00 -0.01 0.01 0.01 -0.01 -0.01 -0.01 -0.00 0.00 0.00 0.00 ]
C [ 0.02 0.03 -0.00 -0.01 0.01 -0.00 0.00 0.01 0.02 0.02 0.02 0.01 0.01 0.01 0.02 0.01 0.00 0.02 -0.01 -0.02 -0.01 0.07 -0.00 -0.02 0.06 0.03 -0.03 -0.00 0.04 0.02 0.01 0.02 0.05 0.00 0.01 0.01 0.01 0.01 ]
G [ 0.00 0.00 0.01 -0.00 -0.00 0.03 0.01 0.00 0.01 0.01 0.01 0.02 0.02 0.01 0.01 0.02 0.02 -0.01 0.01 0.07 -0.03 -0.02 0.04 0.06 0.00 0.00 0.10 -0.01 -0.01 0.00 0.02 -0.01 -0.00 0.03 -0.00 0.00 -0.00 0.01 ]
T [ 0.00 -0.01 -0.02 0.02 0.00 -0.01 0.01 0.01 0.01 -0.00 0.00 0.00 0.00 0.01 -0.00 -0.00 -0.00 0.01 0.01 -0.03 0.06 -0.00 -0.00 0.01 0.01 0.01 -0.02 0.03 0.01 -0.00 0.00 0.02 -0.01 0.00 0.01 -0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1614

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1302

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 954

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 388

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 341

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 301

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 245

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 236

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 187

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 128

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 119

CWM

PFM

     

HCWM

2 profiles found for the same TF (ZNF317) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001233.1 ZNF317 ENCSR795KRU WTC11 Homo sapiens MA1593.2
BP001234.1 ZNF317 ENCSR976MXN K562 Homo sapiens MA1593.2
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