Detailed information of deep learning profile BP001233.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF317 in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF317
Model ID: BP001233.1
Cell line/tissue: WTC11
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1593.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q96PQ6  
Source: ENCSR795KRU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.01 0.01 0.01 0.01 0.02 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 ]
C [ 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.10 -0.00 -0.00 0.07 0.00 -0.00 -0.00 0.02 0.00 0.00 0.00 0.07 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.01 -0.00 -0.00 0.06 -0.00 -0.00 0.00 0.09 -0.00 -0.00 0.15 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 -0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 -0.00 0.09 -0.00 -0.01 -0.00 0.00 0.00 -0.00 0.03 0.00 -0.00 -0.00 0.02 -0.00 0.00 0.01 -0.00 -0.00 ]

Frequency matrix

       
A [ 398 470 526 2227 745 886 706 394 363 330 448 510 760 1217 597 773 2250 1004 2375 2132 1266 56 134 1357 178 106 536 87 359 311 2015 992 329 177 336 550 1969 507 695 650 733 633 612 670 503 488 530 555 581 638 ]
C [ 608 1235 1721 522 509 488 404 556 611 637 2073 696 536 1079 604 485 395 284 348 126 59 54 3187 264 57 2903 298 10 337 1480 670 653 568 2902 509 573 582 755 811 549 671 829 673 761 953 1654 1612 923 790 559 ]
G [ 426 1109 305 370 745 977 1902 492 342 429 366 396 1776 547 467 1822 575 1894 373 535 2231 23 41 339 3058 102 140 3482 88 209 185 818 152 129 387 696 502 344 774 1471 1064 779 1044 469 443 463 519 469 466 590 ]
T [ 2163 781 1043 476 1596 1244 583 2153 2279 2199 708 1993 523 752 1927 515 375 413 499 802 39 3462 233 1635 302 484 2621 16 2811 1595 725 1132 2546 387 2363 1776 542 1989 1315 925 1127 1354 1266 1695 1696 990 934 1648 1758 1808 ]

Hypothetical CWM

   
A [ -0.01 -0.01 -0.00 0.04 -0.01 0.01 0.01 -0.02 -0.02 -0.01 -0.01 -0.01 -0.00 0.00 -0.00 0.00 0.01 0.02 0.01 0.01 0.04 -0.05 -0.01 0.01 -0.01 -0.04 -0.00 -0.00 -0.00 -0.02 0.00 0.00 -0.02 -0.02 -0.03 -0.02 0.01 -0.00 ]
C [ 0.01 0.03 0.05 -0.01 -0.01 0.02 -0.00 0.01 0.02 0.02 0.03 0.02 0.02 0.01 0.02 0.02 0.01 0.00 0.02 0.00 -0.04 -0.04 0.11 -0.01 -0.04 0.08 0.04 -0.06 -0.01 0.07 0.03 0.02 0.03 0.08 0.00 0.01 0.02 0.02 ]
G [ 0.01 0.00 -0.01 0.01 -0.01 -0.01 0.04 0.01 0.00 0.02 0.01 0.01 0.03 0.02 0.01 0.03 0.03 0.03 -0.01 0.00 0.10 -0.05 -0.05 0.06 0.10 -0.03 -0.01 0.15 -0.04 -0.03 0.00 0.02 -0.02 -0.01 0.04 -0.02 0.01 -0.00 ]
T [ -0.00 -0.01 -0.02 -0.02 0.02 -0.00 -0.02 0.01 0.01 -0.00 -0.01 -0.00 -0.01 -0.01 -0.00 -0.02 -0.01 -0.01 0.00 0.01 -0.05 0.09 -0.02 -0.01 -0.01 0.01 0.00 -0.04 0.03 0.01 -0.01 -0.00 0.02 -0.02 0.01 0.02 -0.02 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1242

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 713

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 216

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 194

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 101

CWM

PFM

     

HCWM

2 profiles found for the same TF (ZNF317) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001232.1 ZNF317 ENCSR016OHL HepG2 Homo sapiens MA1593.2
BP001234.1 ZNF317 ENCSR976MXN K562 Homo sapiens MA1593.2
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