Detailed information of deep learning profile BP001232.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF317 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF317
Model ID: BP001232.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1593.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q96PQ6  
Source: ENCSR016OHL
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.01 0.00 -0.00 0.02 -0.00 -0.00 0.00 0.02 -0.00 0.01 0.00 0.00 -0.00 -0.00 0.06 -0.00 0.00 0.00 -0.00 -0.00 ]
C [ -0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.10 0.00 -0.00 0.05 0.00 -0.00 0.00 0.04 0.00 -0.00 0.01 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.04 0.00 -0.00 0.00 0.02 -0.00 0.00 0.00 0.04 -0.00 0.00 0.06 -0.00 -0.00 -0.00 0.00 -0.00 0.00 ]
T [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.01 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.01 -0.00 -0.00 0.01 0.01 0.01 0.01 0.01 ]

Frequency matrix

       
A [ 778 1239 1237 1166 876 922 1366 1161 862 1049 1043 886 1109 1366 636 1544 1657 410 2030 944 729 1109 2324 9 2139 394 424 1062 212 2922 37 855 616 514 458 545 1412 739 561 1359 699 1499 1564 1509 626 1092 1411 534 674 796 ]
C [ 905 572 519 512 489 464 458 471 925 700 685 931 556 344 429 397 476 169 138 568 217 159 112 2997 118 158 2305 312 45 23 2071 364 340 1236 573 1181 512 622 1245 460 451 435 401 516 1279 627 484 437 406 652 ]
G [ 547 582 704 774 1077 1056 675 739 586 625 625 601 741 748 609 544 492 2238 524 604 644 1444 306 2 174 2350 77 179 2627 32 47 92 399 282 451 554 477 652 526 586 1382 657 597 548 389 501 503 533 1328 1068 ]
T [ 805 642 575 583 593 593 536 664 662 661 682 617 629 577 1361 550 410 218 343 919 1445 323 293 27 604 133 229 1482 151 58 880 1724 1680 1003 1553 755 634 1022 703 630 503 444 473 462 741 815 637 1531 627 519 ]

Hypothetical CWM

   
A [ -0.00 0.00 -0.00 0.01 0.00 -0.01 0.02 0.00 -0.00 0.01 0.03 -0.02 0.01 0.01 0.01 -0.00 -0.00 0.06 -0.03 0.01 0.01 -0.00 -0.00 -0.00 0.01 0.00 0.00 0.00 -0.00 0.01 0.01 0.01 -0.01 0.00 0.02 -0.02 -0.01 0.00 ]
C [ 0.01 -0.00 0.00 -0.00 0.03 -0.00 -0.01 0.02 0.00 -0.01 -0.01 0.10 0.00 0.00 0.06 0.04 -0.02 -0.03 0.07 0.01 -0.01 0.02 0.02 0.01 0.01 0.02 0.02 0.01 0.01 0.01 0.00 0.01 0.03 -0.00 -0.00 0.01 0.00 0.00 ]
G [ 0.01 0.01 0.01 0.01 0.00 0.05 0.02 0.01 0.02 0.04 -0.00 -0.03 0.03 0.06 -0.02 -0.00 0.07 -0.01 -0.02 -0.01 0.02 0.00 0.01 0.02 0.01 0.01 0.01 0.02 0.02 0.02 0.01 0.00 -0.00 0.01 -0.01 -0.00 0.03 0.02 ]
T [ 0.00 0.00 0.00 -0.00 -0.01 -0.01 -0.01 0.01 0.01 -0.01 -0.00 0.00 0.01 -0.02 -0.00 0.02 0.00 -0.03 0.04 0.02 0.01 0.02 0.01 0.01 0.00 0.00 -0.00 0.00 0.00 -0.01 -0.01 -0.01 0.01 0.01 -0.01 0.03 0.01 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1614

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1302

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 954

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 388

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 341

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 301

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 245

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 236

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 187

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 128

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 119

CWM

PFM

     

HCWM

2 profiles found for the same TF (ZNF317) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001233.1 ZNF317 ENCSR795KRU WTC11 Homo sapiens MA1593.2
BP001234.1 ZNF317 ENCSR976MXN K562 Homo sapiens MA1593.2
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