Detailed information of deep learning profile BP001228.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF281 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF281
Model ID: BP001228.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1630.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9Y2X9  
Source: ENCSR403MJY
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 0.03 0.04 0.07 0.03 0.00 0.09 0.09 0.08 0.09 0.09 0.01 0.01 0.01 0.01 ]
G [ -0.00 0.00 -0.00 0.01 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2287 2324 1247 1157 1124 1159 1146 1573 1154 1147 2218 2221 1043 1139 1097 1001 1258 985 1165 935 1044 388 304 10 943 1045 0 3 9 0 5 4412 1406 1037 1001 1202 1191 1288 1146 1200 1198 1281 1431 1335 1365 1317 1322 1183 1367 1281 ]
C [ 2082 1999 1973 3078 3295 2015 2441 2022 2054 3061 2113 2052 2206 2272 2204 3170 2514 2513 2857 3313 1508 6357 6523 7285 5099 108 7316 7313 7128 7314 7309 1298 2926 4152 3735 2621 3011 2157 3161 2233 2179 3193 2821 2014 3135 3120 2116 2240 2128 3063 ]
G [ 1680 1602 2755 1685 1470 1558 2234 2218 2632 1483 1621 1522 1408 2492 2735 1377 2201 2421 2112 1083 3086 185 108 6 21 1166 1 2 2 1 3 585 2080 925 1448 1405 1657 2627 1723 1552 2707 1567 1524 2445 1556 1585 1525 1710 2492 1715 ]
T [ 1269 1393 1343 1398 1429 2586 1497 1505 1478 1627 1366 1523 2661 1415 1282 1770 1345 1399 1184 1987 1680 388 383 17 1255 4999 1 0 179 3 1 1023 906 1204 1134 2090 1459 1246 1288 2333 1234 1277 1542 1524 1262 1296 2355 2185 1331 1259 ]

Hypothetical CWM

   
A [ 0.00 -0.01 -0.01 -0.00 0.00 -0.00 -0.02 0.01 -0.01 -0.03 -0.02 -0.03 -0.03 -0.02 0.01 0.00 -0.01 -0.01 ]
C [ 0.01 0.01 0.01 0.00 0.04 0.04 0.07 0.04 0.03 0.09 0.09 0.08 0.09 0.09 0.03 0.03 0.02 0.01 ]
G [ 0.00 0.00 0.00 0.01 -0.01 -0.01 -0.01 -0.03 -0.01 -0.01 -0.01 -0.02 -0.02 -0.03 -0.00 -0.00 0.01 0.02 ]
T [ -0.00 0.00 0.00 -0.00 -0.02 -0.01 -0.03 0.01 0.01 -0.03 -0.05 -0.01 -0.03 -0.03 -0.01 0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2903

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2328

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1468

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 939

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 411

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 340

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 157

CWM

PFM

     

HCWM

2 profiles found for the same TF (ZNF281) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001226.1 ZNF281 ENCSR032DGZ WTC11 Homo sapiens MA1630.3
BP001227.1 ZNF281 ENCSR214EKV K562 Homo sapiens MA1630.3
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