Detailed information of deep learning profile BP001226.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF281 in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF281
Model ID: BP001226.1
Cell line/tissue: WTC11
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1630.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9Y2X9  
Source: ENCSR032DGZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.02 0.02 0.03 0.01 0.00 0.04 0.04 0.04 0.04 0.04 0.00 0.01 0.01 0.00 ]
G [ -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.01 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 385 387 364 373 364 556 368 341 696 721 335 387 331 333 375 297 356 257 313 51 51 5 273 258 0 3 0 0 11 1446 500 299 290 397 386 349 366 352 410 395 497 438 409 447 363 386 395 439 687 364 ]
C [ 713 1045 1092 700 892 745 715 1093 717 781 833 751 797 1109 803 864 1121 1181 492 2381 2407 2503 1861 80 2516 2513 2492 2513 2497 483 1125 1429 1347 981 1063 813 1020 867 820 1121 955 775 1094 1008 785 806 755 1067 718 747 ]
G [ 980 615 591 604 779 770 943 558 592 569 494 927 951 475 805 928 638 380 1023 31 19 2 3 294 0 0 5 0 6 221 604 365 453 436 607 893 611 577 861 585 573 831 590 615 545 595 855 565 620 979 ]
T [ 438 469 469 839 481 445 490 524 511 445 854 451 437 599 533 427 401 698 688 53 39 6 379 1884 0 0 19 3 2 366 287 423 426 702 460 461 519 720 425 415 491 472 423 446 823 729 511 445 491 426 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.02 0.00 -0.01 -0.02 -0.02 -0.03 -0.02 -0.01 0.01 -0.00 -0.01 -0.00 ]
C [ 0.00 0.01 0.01 -0.00 0.02 0.02 0.03 0.02 0.00 0.04 0.04 0.04 0.04 0.04 0.01 0.01 0.01 0.01 ]
G [ 0.00 0.00 -0.00 0.01 -0.01 -0.00 0.00 -0.02 0.00 -0.01 0.00 -0.00 0.00 -0.01 -0.00 -0.00 0.00 0.01 ]
T [ -0.00 -0.00 0.00 0.00 -0.01 -0.01 -0.02 0.00 0.01 -0.01 -0.02 -0.01 -0.02 -0.02 -0.01 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 411

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 327

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 292

CWM

PFM

     

HCWM

2 profiles found for the same TF (ZNF281) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001227.1 ZNF281 ENCSR214EKV K562 Homo sapiens MA1630.3
BP001228.1 ZNF281 ENCSR403MJY HepG2 Homo sapiens MA1630.3
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