Detailed information of deep learning profile BP001227.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF281 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF281
Model ID: BP001227.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1630.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9Y2X9  
Source: ENCSR214EKV
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
C [ 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 ]
G [ 0.01 0.01 0.01 0.01 0.07 0.08 0.07 0.08 0.08 0.00 0.03 0.06 0.03 0.03 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2481 2417 2488 2414 2932 3074 2383 2372 2669 2473 2399 2355 2882 2350 2277 2471 2686 2129 1938 1647 1496 12 2 264 2 3 7071 1829 31 720 755 2971 3251 2334 2401 2515 2793 2432 2510 3290 2612 2479 2660 2635 2681 2702 3232 2376 2622 2413 ]
C [ 2960 2572 2445 2809 2486 2238 2294 2272 2763 2245 2149 2998 2342 2614 2937 1974 1880 1946 1334 2060 869 11 5 0 0 1 1496 30 14 207 458 3747 1699 2449 2703 2537 2231 2984 2862 2060 2276 2336 2297 2957 2660 2872 2406 2359 2423 3216 ]
G [ 3230 3144 3713 3212 3241 3114 3913 3836 3212 3864 4110 3371 3421 3907 3411 4311 4427 4841 5691 4729 2032 10764 10786 10526 10790 10792 165 7300 10729 9192 8937 2502 4235 4280 3959 3918 3905 3436 3425 3448 3161 3323 3769 3139 3119 3292 3090 3893 3705 3090 ]
T [ 2125 2663 2150 2361 2137 2370 2206 2316 2152 2214 2138 2072 2151 1925 2171 2040 1803 1880 1833 2360 6399 9 3 6 4 0 2064 1637 22 677 646 1576 1611 1733 1733 1826 1867 1944 1999 1998 2747 2658 2070 2065 2336 1930 2068 2168 2046 2077 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 -0.00 -0.01 -0.03 -0.03 -0.02 -0.03 -0.03 0.01 0.00 -0.02 -0.01 -0.01 0.00 0.01 0.00 0.00 ]
C [ 0.01 0.01 0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.02 -0.01 -0.00 -0.03 -0.02 -0.01 -0.01 0.01 0.00 0.00 0.00 ]
G [ 0.01 0.01 0.02 0.03 0.03 0.07 0.08 0.07 0.08 0.08 0.02 0.04 0.06 0.04 0.03 0.00 0.01 0.01 0.01 ]
T [ 0.00 -0.00 0.00 0.00 0.01 -0.02 -0.03 -0.03 -0.02 -0.02 0.00 0.01 -0.01 0.00 0.00 0.00 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 8887

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3098

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2310

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1457

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 77

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 36

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 28

CWM

PFM

     

HCWM

2 profiles found for the same TF (ZNF281) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001226.1 ZNF281 ENCSR032DGZ WTC11 Homo sapiens MA1630.3
BP001228.1 ZNF281 ENCSR403MJY HepG2 Homo sapiens MA1630.3
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