Detailed information of deep learning profile BP001228.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF281 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF281
Model ID: BP001228.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1630.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9Y2X9  
Source: ENCSR403MJY
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.01 -0.00 0.00 -0.00 ]
G [ 0.01 0.01 0.01 0.01 0.09 0.09 0.08 0.09 0.09 0.00 0.03 0.07 0.04 0.03 0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1259 1331 2185 2355 1296 1262 1524 1542 1277 1234 2333 1288 1246 1459 2090 1134 1204 906 1023 1 3 179 0 1 4999 1255 17 383 388 1680 1987 1184 1399 1345 1770 1282 1415 2661 1523 1366 1627 1478 1505 1497 2586 1429 1398 1343 1393 1269 ]
C [ 1715 2492 1710 1525 1585 1556 2445 1524 1567 2707 1552 1723 2627 1657 1405 1448 925 2080 585 3 1 2 2 1 1166 21 6 108 185 3086 1083 2112 2421 2201 1377 2735 2492 1408 1522 1621 1483 2632 2218 2234 1558 1470 1685 2755 1602 1680 ]
G [ 3063 2128 2240 2116 3120 3135 2014 2821 3193 2179 2233 3161 2157 3011 2621 3735 4152 2926 1298 7309 7314 7128 7313 7316 108 5099 7285 6523 6357 1508 3313 2857 2513 2514 3170 2204 2272 2206 2052 2113 3061 2054 2022 2441 2015 3295 3078 1973 1999 2082 ]
T [ 1281 1367 1183 1322 1317 1365 1335 1431 1281 1198 1200 1146 1288 1191 1202 1001 1037 1406 4412 5 0 9 3 0 1045 943 10 304 388 1044 935 1165 985 1258 1001 1097 1139 1043 2221 2218 1147 1154 1573 1146 1159 1124 1157 1247 2324 2287 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.00 -0.01 -0.03 -0.03 -0.01 -0.05 -0.03 0.01 0.01 -0.03 -0.01 -0.02 -0.00 0.00 0.00 -0.00 ]
C [ 0.02 0.01 -0.00 -0.00 -0.03 -0.02 -0.02 -0.01 -0.01 -0.01 -0.03 -0.01 -0.01 -0.01 0.01 0.00 0.00 0.00 ]
G [ 0.01 0.02 0.03 0.03 0.09 0.09 0.08 0.09 0.09 0.03 0.04 0.07 0.04 0.04 0.00 0.01 0.01 0.01 ]
T [ -0.01 -0.01 0.00 0.01 -0.02 -0.03 -0.03 -0.02 -0.03 -0.01 0.01 -0.02 -0.00 0.00 -0.00 -0.01 -0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2903

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2328

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1468

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 939

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 411

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 340

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 157

CWM

PFM

     

HCWM

2 profiles found for the same TF (ZNF281) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001226.1 ZNF281 ENCSR032DGZ WTC11 Homo sapiens MA1630.3
BP001227.1 ZNF281 ENCSR214EKV K562 Homo sapiens MA1630.3
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