Detailed information of deep learning profile BP001227.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF281 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF281
Model ID: BP001227.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1630.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9Y2X9  
Source: ENCSR214EKV
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.03 0.03 0.06 0.03 0.00 0.08 0.08 0.07 0.08 0.07 0.01 0.01 0.01 0.01 ]
G [ 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 ]
T [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 2077 2046 2168 2068 1930 2336 2065 2070 2658 2747 1998 1999 1944 1867 1826 1733 1733 1611 1576 646 677 22 1637 2064 0 4 6 3 9 6399 2360 1833 1880 1803 2040 2171 1925 2151 2072 2138 2214 2152 2316 2206 2370 2137 2361 2150 2663 2125 ]
C [ 3090 3705 3893 3090 3292 3119 3139 3769 3323 3161 3448 3425 3436 3905 3918 3959 4280 4235 2502 8937 9192 10729 7300 165 10792 10790 10526 10786 10764 2032 4729 5691 4841 4427 4311 3411 3907 3421 3371 4110 3864 3212 3836 3913 3114 3241 3212 3713 3144 3230 ]
G [ 3216 2423 2359 2406 2872 2660 2957 2297 2336 2276 2060 2862 2984 2231 2537 2703 2449 1699 3747 458 207 14 30 1496 1 0 0 5 11 869 2060 1334 1946 1880 1974 2937 2614 2342 2998 2149 2245 2763 2272 2294 2238 2486 2809 2445 2572 2960 ]
T [ 2413 2622 2376 3232 2702 2681 2635 2660 2479 2612 3290 2510 2432 2793 2515 2401 2334 3251 2971 755 720 31 1829 7071 3 2 264 2 12 1496 1647 1938 2129 2686 2471 2277 2350 2882 2355 2399 2473 2669 2372 2383 3074 2932 2414 2488 2417 2481 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.01 0.01 0.00 -0.02 -0.02 -0.03 -0.03 -0.02 0.01 0.00 0.00 -0.00 0.00 ]
C [ 0.01 0.01 0.01 0.00 0.03 0.04 0.06 0.04 0.02 0.08 0.08 0.07 0.08 0.07 0.03 0.03 0.02 0.01 0.01 ]
G [ 0.00 0.00 0.00 0.01 -0.01 -0.01 -0.02 -0.03 -0.00 -0.01 -0.02 -0.01 -0.01 -0.01 -0.00 -0.00 0.00 0.01 0.01 ]
T [ 0.00 0.00 0.01 0.00 -0.01 -0.01 -0.02 0.00 0.01 -0.03 -0.03 -0.02 -0.03 -0.03 -0.01 -0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 8887

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3098

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2310

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1457

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 77

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 36

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 28

CWM

PFM

     

HCWM

2 profiles found for the same TF (ZNF281) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001226.1 ZNF281 ENCSR032DGZ WTC11 Homo sapiens MA1630.3
BP001228.1 ZNF281 ENCSR403MJY HepG2 Homo sapiens MA1630.3
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