Detailed information of deep learning profile BP001208.1

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This page shows detailed deep learning-derived predictions and motifs for POU5F1 in bipolar neuron using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: POU5F1
Model ID: BP001208.1
Cell line/tissue: bipolar neuron
Class: Homeo domain factors
Family: POU domain factors
JASPAR ID: MA1115.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q01860  
Source: ENCSR362VCG
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.00 0.02 0.00 0.00 -0.00 -0.00 -0.00 0.02 -0.00 0.00 0.00 -0.00 0.01 0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.04 0.00 -0.00 -0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.03 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.01 0.00 ]
T [ -0.00 0.00 0.00 -0.00 -0.00 0.02 0.01 0.01 -0.00 -0.00 -0.00 0.02 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 105 107 101 108 91 95 110 83 100 110 101 107 114 106 77 48 67 98 351 14 30 66 27 4 409 17 225 194 33 347 361 169 129 106 108 102 90 117 110 100 95 86 77 87 90 112 105 95 89 113 ]
C [ 109 83 113 121 106 126 113 120 107 93 100 97 96 119 143 109 138 202 19 8 57 18 10 415 3 4 16 27 178 16 17 44 50 78 136 131 124 110 118 120 100 97 115 102 87 99 116 100 113 115 ]
G [ 99 116 125 105 89 87 92 92 105 127 118 125 123 114 104 100 98 60 20 5 15 6 382 1 3 5 87 12 104 22 33 32 191 202 109 80 98 102 93 107 120 116 121 128 134 115 119 119 128 93 ]
T [ 108 115 82 87 135 113 106 126 109 91 102 92 88 82 97 164 118 61 31 394 319 331 2 1 6 395 93 188 106 36 10 176 51 35 68 108 109 92 100 94 106 122 108 104 110 95 81 107 91 100 ]

Hypothetical CWM

   
A [ -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.01 -0.01 -0.01 -0.00 0.02 -0.01 -0.01 -0.01 -0.01 -0.01 0.02 -0.01 0.01 0.00 -0.01 0.01 0.01 -0.01 -0.00 -0.01 -0.01 -0.01 -0.01 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.01 0.01 0.01 0.01 -0.01 -0.01 -0.01 0.01 -0.00 0.04 -0.02 -0.00 -0.01 0.00 0.01 0.00 -0.01 0.00 0.00 0.01 0.01 0.01 0.01 0.00 0.01 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.01 0.01 0.00 0.01 0.01 0.01 0.01 0.00 -0.00 -0.02 -0.01 -0.02 0.04 -0.00 0.01 -0.01 0.01 -0.01 0.01 0.00 -0.00 -0.01 0.01 0.01 0.01 0.01 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.01 -0.01 0.02 0.01 0.01 -0.02 -0.01 -0.01 0.02 -0.00 0.00 -0.00 -0.02 -0.01 0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3148

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1328

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 555

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 360

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 144

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 130

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 38

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 27

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 23

CWM

PFM

     

HCWM

2 profiles found for the same TF (POU5F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001206.1 POU5F1 ENCSR000BMU H1 Homo sapiens MA1115.2
BP001207.1 POU5F1 ENCSR264RJX GM23338 Homo sapiens MA1115.2
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