Detailed information of deep learning profile BP001206.1

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This page shows detailed deep learning-derived predictions and motifs for POU5F1 in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: POU5F1
Model ID: BP001206.1
Cell line/tissue: H1
Class: Homeo domain factors
Family: POU domain factors
JASPAR ID: MA1115.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q01860  
Source: ENCSR000BMU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 0.00 -0.00 0.06 -0.00 -0.00 -0.00 0.02 0.02 0.03 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.01 0.01 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.03 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.02 -0.00 -0.00 -0.00 -0.00 0.05 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 0.00 0.01 0.05 0.04 -0.00 0.03 0.01 -0.00 0.06 0.00 0.00 0.00 -0.00 -0.00 0.01 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1332 1297 1376 1366 1158 1272 1297 1401 1582 1524 1285 1232 1238 1437 1285 780 337 480 2022 111 330 765 1482 925 4837 80 47 84 3865 3093 4111 963 1095 1486 1572 1197 1099 1180 1351 1315 1311 1348 1526 1277 1464 1464 1295 1219 1311 1391 ]
C [ 1114 1229 1275 1294 1421 1389 1367 1257 1097 1227 1201 1282 1125 1154 1106 1351 2519 2535 275 146 79 1137 93 1309 35 27 10 3444 84 293 238 595 884 1118 1223 1193 1475 1451 1356 1344 1287 1173 1118 1095 1036 1087 1215 1391 1266 1165 ]
G [ 1341 1220 1189 1170 1152 1057 1141 1214 1123 1199 1306 1369 1412 1241 1256 1365 971 375 218 165 152 2914 115 525 96 49 4376 503 235 1125 410 667 1575 1126 1227 1468 1250 1079 1000 1131 1030 1096 1180 1422 1266 1357 1247 1200 1101 1288 ]
T [ 1372 1413 1319 1329 1428 1441 1354 1287 1357 1209 1367 1276 1384 1327 1512 1663 1332 1769 2644 4737 4598 343 3469 2400 191 5003 726 1128 975 648 400 2934 1605 1429 1137 1301 1335 1449 1452 1369 1531 1542 1335 1365 1393 1251 1402 1349 1481 1315 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.01 -0.02 -0.01 0.03 -0.02 -0.00 0.00 0.01 0.00 0.07 -0.02 -0.02 -0.03 0.03 0.03 0.04 0.00 -0.00 0.00 0.00 ]
C [ 0.01 0.01 0.01 0.01 0.03 0.02 -0.02 -0.01 -0.03 0.01 -0.04 0.01 -0.04 -0.01 -0.05 0.05 -0.03 -0.02 -0.02 -0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.01 0.00 -0.02 -0.02 -0.02 0.04 -0.01 -0.02 -0.02 -0.03 0.06 -0.00 0.01 -0.00 -0.01 0.00 0.01 0.01 0.01 ]
T [ -0.01 -0.01 0.00 0.00 0.00 0.01 0.02 0.05 0.05 -0.01 0.04 0.02 -0.01 0.06 0.02 0.01 0.01 0.00 -0.01 0.02 0.00 -0.00 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 285

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 230

CWM

PFM

     

HCWM

2 profiles found for the same TF (POU5F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001207.1 POU5F1 ENCSR264RJX GM23338 Homo sapiens MA1115.2
BP001208.1 POU5F1 ENCSR362VCG bipolar neuron Homo sapiens MA1115.2
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