Detailed information of deep learning profile BP001208.1

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This page shows detailed deep learning-derived predictions and motifs for POU5F1 in bipolar neuron using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: POU5F1
Model ID: BP001208.1
Cell line/tissue: bipolar neuron
Class: Homeo domain factors
Family: POU domain factors
JASPAR ID: MA1115.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q01860  
Source: ENCSR362VCG
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.02 -0.00 -0.00 -0.00 0.01 0.01 0.02 -0.00 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.01 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.03 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 -0.00 -0.00 0.00 0.04 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.01 0.01 -0.00 0.00 0.00 -0.00 0.02 -0.00 -0.00 -0.00 0.00 0.00 0.02 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 100 91 107 81 95 110 104 108 122 106 94 100 92 109 108 68 35 51 176 10 36 106 188 93 395 6 1 2 331 319 394 31 61 118 164 97 82 88 92 102 91 109 126 106 113 135 87 82 115 108 ]
C [ 93 128 119 119 115 134 128 121 116 120 107 93 102 98 80 109 202 191 32 33 22 104 12 87 5 3 1 382 6 15 5 20 60 98 100 104 114 123 125 118 127 105 92 92 87 89 105 125 116 99 ]
G [ 115 113 100 116 99 87 102 115 97 100 120 118 110 124 131 136 78 50 44 17 16 178 27 16 4 3 415 10 18 57 8 19 202 138 109 143 119 96 97 100 93 107 120 113 126 106 121 113 83 109 ]
T [ 113 89 95 105 112 90 87 77 86 95 100 110 117 90 102 108 106 129 169 361 347 33 194 225 17 409 4 27 66 30 14 351 98 67 48 77 106 114 107 101 110 100 83 110 95 91 108 101 107 105 ]

Hypothetical CWM

   
A [ -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 0.00 -0.01 -0.02 -0.00 0.00 -0.00 0.02 -0.01 -0.01 -0.02 0.01 0.01 0.02 -0.01 -0.01 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.01 0.01 0.01 0.01 -0.01 -0.00 0.00 0.01 -0.01 0.01 -0.01 0.01 -0.00 0.04 -0.02 -0.01 -0.02 -0.00 0.00 0.01 0.01 0.01 0.01 0.00 0.01 0.01 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.01 0.00 0.01 0.01 0.01 0.01 0.00 0.00 -0.01 0.00 0.01 0.00 -0.01 -0.00 -0.02 0.04 -0.00 0.01 -0.01 -0.01 -0.01 0.01 0.01 0.01 0.01 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.01 -0.01 -0.01 -0.01 -0.00 -0.01 0.01 0.01 -0.01 0.00 0.01 -0.01 0.02 -0.01 -0.01 -0.01 -0.01 -0.01 0.02 -0.00 -0.01 -0.01 -0.01 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3148

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1328

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 555

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 360

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 144

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 130

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 38

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 27

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 23

CWM

PFM

     

HCWM

2 profiles found for the same TF (POU5F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001206.1 POU5F1 ENCSR000BMU H1 Homo sapiens MA1115.2
BP001207.1 POU5F1 ENCSR264RJX GM23338 Homo sapiens MA1115.2
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