Detailed information of deep learning profile BP001206.1

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This page shows detailed deep learning-derived predictions and motifs for POU5F1 in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: POU5F1
Model ID: BP001206.1
Cell line/tissue: H1
Class: Homeo domain factors
Family: POU domain factors
JASPAR ID: MA1115.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q01860  
Source: ENCSR000BMU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.01 -0.00 -0.00 0.00 0.00 0.00 0.06 -0.00 0.01 0.03 -0.00 0.04 0.05 0.01 0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.05 -0.00 -0.00 -0.00 -0.00 0.02 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.03 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.01 0.01 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.03 0.02 0.02 -0.00 -0.00 -0.00 0.06 -0.00 0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1315 1481 1349 1402 1251 1393 1365 1335 1542 1531 1369 1452 1449 1335 1301 1137 1429 1605 2934 400 648 975 1128 726 5003 191 2400 3469 343 4598 4737 2644 1769 1332 1663 1512 1327 1384 1276 1367 1209 1357 1287 1354 1441 1428 1329 1319 1413 1372 ]
C [ 1288 1101 1200 1247 1357 1266 1422 1180 1096 1030 1131 1000 1079 1250 1468 1227 1126 1575 667 410 1125 235 503 4376 49 96 525 115 2914 152 165 218 375 971 1365 1256 1241 1412 1369 1306 1199 1123 1214 1141 1057 1152 1170 1189 1220 1341 ]
G [ 1165 1266 1391 1215 1087 1036 1095 1118 1173 1287 1344 1356 1451 1475 1193 1223 1118 884 595 238 293 84 3444 10 27 35 1309 93 1137 79 146 275 2535 2519 1351 1106 1154 1125 1282 1201 1227 1097 1257 1367 1389 1421 1294 1275 1229 1114 ]
T [ 1391 1311 1219 1295 1464 1464 1277 1526 1348 1311 1315 1351 1180 1099 1197 1572 1486 1095 963 4111 3093 3865 84 47 80 4837 925 1482 765 330 111 2022 480 337 780 1285 1437 1238 1232 1285 1524 1582 1401 1297 1272 1158 1366 1376 1297 1332 ]

Hypothetical CWM

   
A [ -0.01 -0.00 0.00 0.02 -0.01 0.00 0.01 0.01 0.02 0.06 -0.01 0.02 0.04 -0.01 0.05 0.05 0.02 0.01 0.00 0.00 0.00 -0.01 -0.01 ]
C [ 0.01 0.01 0.01 0.00 -0.01 -0.00 0.01 -0.00 0.06 -0.03 -0.02 -0.02 -0.01 0.04 -0.02 -0.02 -0.02 0.00 0.01 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 -0.01 -0.02 -0.02 -0.03 0.05 -0.05 -0.01 -0.04 0.01 -0.04 0.01 -0.03 -0.01 -0.02 0.02 0.03 0.01 0.01 0.01 0.01 ]
T [ 0.00 0.00 -0.00 0.00 0.04 0.03 0.03 -0.03 -0.02 -0.02 0.07 0.00 0.01 0.00 -0.00 -0.02 0.03 -0.01 -0.02 -0.01 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 285

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 230

CWM

PFM

     

HCWM

2 profiles found for the same TF (POU5F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001207.1 POU5F1 ENCSR264RJX GM23338 Homo sapiens MA1115.2
BP001208.1 POU5F1 ENCSR362VCG bipolar neuron Homo sapiens MA1115.2
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