Detailed information of deep learning profile BP001168.1

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This page shows detailed deep learning-derived predictions and motifs for E2F8 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E2F8
Model ID: BP001168.1
Cell line/tissue: K562
Class: Fork head/winged helix factors
Family: E2F
JASPAR ID: MA0865.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: A0AVK6  
Source: ENCSR953DVM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.00 0.02 0.02 0.04 0.00 0.03 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.01 0.00 0.00 -0.00 0.00 ]
T [ -0.00 0.00 0.01 0.01 0.02 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 420 432 388 415 445 466 409 430 526 437 413 460 481 574 652 385 166 54 22 23 1 2 0 14 909 555 518 512 349 367 445 474 407 490 449 492 363 450 416 426 415 456 411 426 471 462 442 457 431 472 ]
C [ 818 884 887 845 916 818 898 891 791 852 900 884 889 813 667 504 651 119 2006 2011 2458 8 2389 1501 773 700 973 760 923 872 864 803 791 845 856 846 933 832 850 852 929 847 853 831 838 799 833 781 840 803 ]
G [ 714 676 685 707 639 694 681 651 647 671 596 671 671 635 535 519 144 151 233 430 6 2445 58 890 348 449 486 568 672 706 651 661 773 671 721 675 703 737 748 733 690 667 731 731 716 724 706 739 732 707 ]
T [ 513 473 505 498 465 487 477 493 501 505 556 450 424 443 611 1057 1504 2141 204 1 0 10 18 60 435 761 488 625 521 520 505 527 494 459 439 452 466 446 451 454 431 495 470 477 440 480 484 488 462 483 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 -0.00 -0.00 -0.01 -0.02 -0.02 -0.03 -0.02 -0.02 0.01 0.00 0.01 0.00 ]
C [ 0.00 0.00 -0.00 0.01 -0.01 0.02 0.02 0.04 -0.01 0.03 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.02 -0.01 0.04 0.00 0.02 -0.00 0.00 -0.00 0.00 ]
T [ -0.00 0.00 0.01 0.01 0.02 -0.01 -0.02 -0.03 -0.01 -0.01 -0.01 -0.00 0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3735

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 697

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 349

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 101

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 38

CWM

PFM

     

HCWM

2 profiles found for the same TF (E2F8) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001166.1 E2F8 ENCSR793HVL GM12878 Homo sapiens MA0865.3
BP001167.1 E2F8 ENCSR897ZXU MCF-7 Homo sapiens MA0865.3
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