Detailed information of deep learning profile BP001167.1

This page shows detailed deep learning-derived predictions and motifs for E2F8 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E2F8
Model ID: BP001167.1
Cell line/tissue: MCF-7
Class: Fork head/winged helix factors
Family: E2F
JASPAR ID: MA0865.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: A0AVK6  
Source: ENCSR897ZXU
Model: BPNet
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Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 0.02 0.01 0.01 0.00 0.00 ]
C [ 0.00 -0.00 0.00 0.00 0.01 0.00 0.03 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 ]
G [ -0.00 0.00 0.00 0.00 0.01 0.02 0.00 0.03 0.01 0.01 -0.00 0.00 -0.00 -0.00 -0.00 ]
T [ 0.00 0.00 0.00 0.01 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

A [ 172 157 161 163 165 142 164 182 169 164 159 177 174 182 173 168 152 162 198 177 189 196 237 156 200 104 24 11 0 0 24 90 780 577 431 250 171 137 192 185 186 186 175 150 163 162 174 196 169 165 ]
C [ 252 251 256 264 266 261 262 251 251 250 247 263 258 264 255 274 245 278 249 247 271 222 193 200 214 149 338 57 866 4 157 85 25 53 160 177 229 257 231 213 242 227 265 257 254 238 252 223 237 245 ]
G [ 280 296 274 266 276 290 271 268 283 295 302 266 277 282 266 277 306 274 243 309 243 305 255 296 249 232 489 796 0 862 670 672 46 189 126 222 254 282 287 318 274 266 268 276 275 296 281 296 317 307 ]
T [ 162 162 175 173 159 173 169 165 163 157 158 160 157 138 172 147 163 152 176 133 163 143 181 214 203 381 15 2 0 0 15 19 15 47 149 217 212 190 156 150 164 187 158 183 174 170 159 151 143 149 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.01 -0.02 -0.02 -0.03 -0.03 -0.02 -0.01 0.02 0.01 0.01 0.00 -0.00 ]
C [ -0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.03 -0.00 0.01 -0.00 -0.01 -0.01 -0.01 -0.00 -0.00 ]
G [ -0.00 -0.00 -0.00 -0.00 0.01 0.02 -0.00 0.03 0.01 0.01 -0.01 -0.00 -0.01 -0.00 -0.00 ]
T [ 0.00 0.00 -0.00 0.01 -0.02 -0.02 -0.04 -0.03 -0.02 -0.01 -0.01 -0.01 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 42

2 profiles found for the same TF (E2F8) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001166.1 E2F8 ENCSR793HVL GM12878 Homo sapiens MA0865.3
BP001168.1 E2F8 ENCSR953DVM K562 Homo sapiens MA0865.3
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