Detailed information of deep learning profile BP001168.1

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This page shows detailed deep learning-derived predictions and motifs for E2F8 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E2F8
Model ID: BP001168.1
Cell line/tissue: K562
Class: Fork head/winged helix factors
Family: E2F
JASPAR ID: MA0865.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: A0AVK6  
Source: ENCSR953DVM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.02 0.01 0.01 0.00 -0.00 ]
C [ 0.00 -0.00 0.00 0.00 0.01 0.00 0.04 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 0.03 0.00 0.04 0.02 0.02 0.00 0.00 -0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.01 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 483 462 488 484 480 440 477 470 495 431 454 451 446 466 452 439 459 494 527 505 520 521 625 488 761 435 60 18 10 0 1 204 2141 1504 1057 611 443 424 450 556 505 501 493 477 487 465 498 505 473 513 ]
C [ 707 732 739 706 724 716 731 731 667 690 733 748 737 703 675 721 671 773 661 651 706 672 568 486 449 348 890 58 2445 6 430 233 151 144 519 535 635 671 671 596 671 647 651 681 694 639 707 685 676 714 ]
G [ 803 840 781 833 799 838 831 853 847 929 852 850 832 933 846 856 845 791 803 864 872 923 760 973 700 773 1501 2389 8 2458 2011 2006 119 651 504 667 813 889 884 900 852 791 891 898 818 916 845 887 884 818 ]
T [ 472 431 457 442 462 471 426 411 456 415 426 416 450 363 492 449 490 407 474 445 367 349 512 518 555 909 14 0 2 1 23 22 54 166 385 652 574 481 460 413 437 526 430 409 466 445 415 388 432 420 ]

Hypothetical CWM

   
A [ 0.00 -0.00 0.00 -0.00 -0.01 -0.01 -0.01 -0.03 -0.02 -0.01 0.02 0.01 0.01 0.00 -0.00 ]
C [ 0.00 -0.00 0.00 -0.00 0.02 0.00 0.04 -0.01 0.02 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 0.03 -0.01 0.04 0.02 0.02 -0.01 0.01 -0.00 0.00 0.00 ]
T [ 0.00 0.01 0.00 0.01 -0.02 -0.02 -0.03 -0.02 -0.02 -0.01 -0.00 -0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3735

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 697

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 349

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 101

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 38

CWM

PFM

     

HCWM

2 profiles found for the same TF (E2F8) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001166.1 E2F8 ENCSR793HVL GM12878 Homo sapiens MA0865.3
BP001167.1 E2F8 ENCSR897ZXU MCF-7 Homo sapiens MA0865.3
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