Detailed information of deep learning profile BP001167.1

This page shows detailed deep learning-derived predictions and motifs for E2F8 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E2F8
Model ID: BP001167.1
Cell line/tissue: MCF-7
Class: Fork head/winged helix factors
Family: E2F
JASPAR ID: MA0865.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: A0AVK6  
Source: ENCSR897ZXU
Model: BPNet
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Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.01 0.00 0.00 0.00 ]
C [ -0.00 -0.00 -0.00 0.00 -0.00 0.01 0.01 0.03 0.00 0.02 0.01 0.00 0.00 0.00 -0.00 ]
G [ 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.03 0.00 0.01 0.00 0.00 -0.00 0.00 ]
T [ 0.00 0.00 0.01 0.01 0.02 0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]

Frequency matrix

A [ 149 143 151 159 170 174 183 158 187 164 150 156 190 212 217 149 47 15 19 15 0 0 2 15 381 203 214 181 143 163 133 176 152 163 147 172 138 157 160 158 157 163 165 169 173 159 173 175 162 162 ]
C [ 307 317 296 281 296 275 276 268 266 274 318 287 282 254 222 126 189 46 672 670 862 0 796 489 232 249 296 255 305 243 309 243 274 306 277 266 282 277 266 302 295 283 268 271 290 276 266 274 296 280 ]
G [ 245 237 223 252 238 254 257 265 227 242 213 231 257 229 177 160 53 25 85 157 4 866 57 338 149 214 200 193 222 271 247 249 278 245 274 255 264 258 263 247 250 251 251 262 261 266 264 256 251 252 ]
T [ 165 169 196 174 162 163 150 175 186 186 185 192 137 171 250 431 577 780 90 24 0 0 11 24 104 200 156 237 196 189 177 198 162 152 168 173 182 174 177 159 164 169 182 164 142 165 163 161 157 172 ]

Hypothetical CWM

A [ 0.00 0.00 0.00 -0.01 -0.01 -0.01 -0.02 -0.03 -0.04 -0.02 -0.02 0.01 -0.00 0.00 0.00 ]
C [ -0.00 -0.00 -0.01 -0.00 -0.01 0.01 0.01 0.03 -0.00 0.02 0.01 -0.00 -0.00 -0.00 -0.00 ]
G [ -0.00 -0.00 -0.01 -0.01 -0.01 -0.00 0.01 -0.00 0.03 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 ]
T [ -0.00 0.00 0.01 0.01 0.02 -0.01 -0.02 -0.03 -0.03 -0.02 -0.02 -0.01 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 42

2 profiles found for the same TF (E2F8) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001166.1 E2F8 ENCSR793HVL GM12878 Homo sapiens MA0865.3
BP001168.1 E2F8 ENCSR953DVM K562 Homo sapiens MA0865.3
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