Detailed information of deep learning profile BP001153.1

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This page shows detailed deep learning-derived predictions and motifs for TFAP4 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TFAP4
Model ID: BP001153.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0691.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q01664  
Source: ENCSR784IMK
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 -0.00 0.05 0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.01 0.00 0.00 0.01 0.07 0.00 0.00 0.06 0.00 0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.06 0.00 0.00 0.08 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.05 0.00 0.00 0.01 -0.00 -0.00 ]

Frequency matrix

       
A [ 2892 3052 2843 2843 2987 2753 2942 2810 3042 2853 2748 2682 2797 2774 2670 2784 2718 2678 2654 2810 2935 2469 2823 3069 2369 1 13599 0 99 19 4 3761 1382 2650 2833 2640 2783 2630 3256 2641 2779 3091 2813 3038 2958 2758 2804 3014 2788 2912 ]
C [ 3989 3928 3981 3885 3977 4080 3920 4044 3811 4133 4089 4181 4207 4059 4393 4622 3948 4612 5089 4060 3647 5234 4562 4405 7329 13662 6 75 13519 24 3 2751 2818 4617 4834 3532 3767 4822 3639 3393 4424 3696 3755 4035 4024 3880 3980 3788 3933 3992 ]
G [ 3967 3807 3870 3839 3948 3762 3850 4002 3881 3750 3991 3746 3832 3845 3763 3214 4286 3653 3012 3709 4822 3665 3361 3464 1918 6 29 13522 51 2 13663 2727 4421 2985 2645 4469 4149 3612 3691 5005 3785 3667 4238 3788 3768 4048 4060 3744 4015 3914 ]
T [ 2822 2883 2976 3103 2758 3075 2958 2814 2936 2934 2842 3061 2834 2992 2844 3050 2718 2727 2915 3091 2266 2302 2924 2732 2054 1 36 73 1 13625 0 4431 5049 3418 3358 3029 2971 2606 3084 2631 2682 3216 2864 2809 2920 2984 2826 3124 2934 2852 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.01 -0.00 0.01 0.01 -0.02 0.05 -0.03 0.00 -0.02 -0.01 0.00 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.02 0.02 0.01 0.02 0.07 -0.02 -0.01 0.06 0.01 -0.03 -0.00 0.01 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.02 0.00 -0.03 0.01 0.06 -0.01 -0.02 0.08 0.02 0.01 0.02 0.01 0.01 0.01 ]
T [ -0.01 -0.01 -0.00 -0.00 -0.01 0.00 -0.01 -0.02 0.00 -0.03 0.05 -0.02 0.01 0.01 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3429

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2891

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1970

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 488

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 182

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 150

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 106

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 29

CWM

PFM

     

HCWM

2 profiles found for the same TF (TFAP4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001151.1 TFAP4 ENCSR103SZL HepG2 Homo sapiens MA0691.1
BP001152.1 TFAP4 ENCSR587BVQ HepG2 Homo sapiens MA0691.1
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