Detailed information of deep learning profile BP001151.1

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This page shows detailed deep learning-derived predictions and motifs for TFAP4 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TFAP4
Model ID: BP001151.1
Cell line/tissue: HepG2
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0691.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q01664  
Source: ENCSR103SZL
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 0.00 0.05 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.00 0.01 0.07 0.00 0.00 0.05 0.00 0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.05 0.00 0.00 0.08 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.06 0.00 0.00 0.01 0.00 0.00 ]

Frequency matrix

       
A [ 2644 2561 2626 2619 2650 2606 2601 2676 2497 2567 2513 2536 2415 2424 2438 2360 2639 2486 2368 2642 2648 2261 2134 2487 3 11596 0 229 2 0 4289 1072 2176 2582 2604 2937 2461 2841 2560 2534 2784 2635 2552 2576 2572 2485 2623 2576 2586 2719 ]
C [ 3268 3301 3307 3372 3416 3223 3258 3236 3461 3329 3301 3301 3559 3470 3568 3779 3407 3594 3760 3540 3344 3311 4440 5782 11640 4 284 10993 17 0 1826 2856 3239 3353 3771 3100 3350 3036 3175 3351 3044 3241 3407 3454 3259 3336 3248 3254 3372 3250 ]
G [ 3107 3206 3133 3170 3043 3161 3248 3191 3038 3131 3181 3274 3057 3051 2961 3014 2894 3122 2954 3221 3314 3383 2697 1221 0 35 11180 419 0 11644 2135 2574 2415 3138 2754 2845 3346 3213 3238 3107 3209 3259 3117 3100 3106 3203 3129 3253 3103 3037 ]
T [ 2625 2576 2578 2483 2535 2654 2537 2541 2648 2617 2649 2533 2613 2699 2677 2491 2704 2442 2562 2241 2338 2689 2373 2154 1 9 180 3 11625 0 3394 5142 3814 2571 2515 2762 2487 2554 2671 2652 2607 2509 2568 2514 2707 2620 2644 2561 2583 2638 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.01 0.01 -0.02 0.05 -0.04 -0.00 -0.03 -0.02 0.01 -0.01 0.00 0.00 0.00 ]
C [ 0.01 0.01 0.01 0.02 0.07 -0.02 0.01 0.05 0.00 -0.03 -0.01 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 -0.01 -0.03 0.00 0.06 0.01 -0.02 0.08 0.02 0.01 0.01 0.01 0.01 ]
T [ -0.00 -0.00 -0.01 0.01 -0.03 -0.03 -0.00 -0.05 0.06 -0.02 0.01 0.02 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2601

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2588

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 509

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 506

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 233

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 139

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 76

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 65

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 21

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 20

CWM

PFM

     

HCWM

2 profiles found for the same TF (TFAP4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001152.1 TFAP4 ENCSR587BVQ HepG2 Homo sapiens MA0691.1
BP001153.1 TFAP4 ENCSR784IMK K562 Homo sapiens MA0691.1
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