Detailed information of deep learning profile BP001153.1

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This page shows detailed deep learning-derived predictions and motifs for TFAP4 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TFAP4
Model ID: BP001153.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0691.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q01664  
Source: ENCSR784IMK
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.01 0.00 0.00 0.05 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.08 0.00 0.00 0.06 0.00 0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.06 0.00 0.00 0.07 0.01 0.00 0.00 0.01 ]
T [ -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.05 -0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2852 2934 3124 2826 2984 2920 2809 2864 3216 2682 2631 3084 2606 2971 3029 3358 3418 5049 4431 0 13625 1 73 36 1 2054 2732 2924 2302 2266 3091 2915 2727 2718 3050 2844 2992 2834 3061 2842 2934 2936 2814 2958 3075 2758 3103 2976 2883 2822 ]
C [ 3914 4015 3744 4060 4048 3768 3788 4238 3667 3785 5005 3691 3612 4149 4469 2645 2985 4421 2727 13663 2 51 13522 29 6 1918 3464 3361 3665 4822 3709 3012 3653 4286 3214 3763 3845 3832 3746 3991 3750 3881 4002 3850 3762 3948 3839 3870 3807 3967 ]
G [ 3992 3933 3788 3980 3880 4024 4035 3755 3696 4424 3393 3639 4822 3767 3532 4834 4617 2818 2751 3 24 13519 75 6 13662 7329 4405 4562 5234 3647 4060 5089 4612 3948 4622 4393 4059 4207 4181 4089 4133 3811 4044 3920 4080 3977 3885 3981 3928 3989 ]
T [ 2912 2788 3014 2804 2758 2958 3038 2813 3091 2779 2641 3256 2630 2783 2640 2833 2650 1382 3761 4 19 99 0 13599 1 2369 3069 2823 2469 2935 2810 2654 2678 2718 2784 2670 2774 2797 2682 2748 2853 3042 2810 2942 2753 2987 2843 2843 3052 2892 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.00 0.01 0.01 -0.02 0.05 -0.03 0.00 -0.02 -0.01 0.00 -0.01 -0.00 -0.00 -0.01 -0.01 ]
C [ 0.01 0.01 0.01 0.02 0.01 0.02 0.08 -0.02 -0.01 0.06 0.01 -0.03 0.00 0.02 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.01 -0.00 -0.03 0.01 0.06 -0.01 -0.02 0.07 0.02 0.01 0.02 0.02 0.01 0.01 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.01 0.00 -0.01 -0.02 0.00 -0.03 0.05 -0.02 0.01 0.01 -0.00 -0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3429

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2891

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1970

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 488

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 182

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 150

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 106

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 29

CWM

PFM

     

HCWM

2 profiles found for the same TF (TFAP4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001151.1 TFAP4 ENCSR103SZL HepG2 Homo sapiens MA0691.1
BP001152.1 TFAP4 ENCSR587BVQ HepG2 Homo sapiens MA0691.1
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