Detailed information of deep learning profile BP001152.1

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This page shows detailed deep learning-derived predictions and motifs for TFAP4 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TFAP4
Model ID: BP001152.1
Cell line/tissue: HepG2
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0691.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q01664  
Source: ENCSR587BVQ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 0.00 0.04 0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.06 0.00 0.00 0.05 0.00 0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.05 0.00 0.00 0.07 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 0.05 0.00 0.00 0.01 0.00 0.00 ]

Frequency matrix

       
A [ 2343 2341 2426 2338 2341 2358 2331 2382 2273 2352 2215 2273 2163 2292 2234 2176 2229 2105 2251 2092 2038 2257 2203 2139 2490 2215 2 10277 5 134 1 1 3615 1203 2226 2434 2474 2739 2234 2808 2270 2408 2590 2421 2469 2341 2353 2402 2403 2325 ]
C [ 2802 2859 2823 2844 2869 2890 2962 2770 2936 2838 2985 2834 2954 3026 3006 3037 3214 3286 3102 3349 3441 3161 3093 3160 3674 4826 10312 7 143 9978 17 1 1044 2555 2937 2688 3089 2430 3025 2334 2837 2956 2709 2826 2850 2861 2818 2771 2833 2875 ]
G [ 2799 2782 2729 2789 2753 2815 2758 2741 2835 2851 2667 2904 2924 2817 2722 2770 2559 2650 2797 2606 2744 2936 3030 2893 2374 1175 8 19 10070 208 8 10322 2134 2461 1726 2620 2380 2424 2792 2696 2746 2513 2613 2749 2619 2710 2713 2732 2666 2713 ]
T [ 2382 2344 2348 2355 2363 2263 2275 2433 2282 2285 2459 2315 2285 2191 2364 2343 2324 2285 2176 2279 2103 1972 2000 2134 1788 2110 4 23 108 6 10300 2 3533 4107 3437 2584 2383 2733 2275 2488 2473 2449 2414 2330 2388 2414 2442 2421 2424 2413 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.00 0.01 0.01 -0.01 0.04 -0.03 -0.00 -0.02 -0.02 0.01 -0.01 0.00 0.00 -0.00 0.00 ]
C [ 0.01 0.01 0.01 0.01 0.01 0.01 0.06 -0.01 0.01 0.05 0.00 -0.03 -0.00 0.01 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.02 -0.00 -0.02 0.01 0.05 0.01 -0.01 0.07 0.01 0.01 0.01 0.01 0.01 0.01 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.01 0.01 -0.02 -0.02 -0.00 -0.03 0.05 -0.01 0.01 0.01 0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 6992

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3839

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2839

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 2338

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1424

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 951

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 896

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 645

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 400

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 356

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 290

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 56

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 20

CWM

PFM

     

HCWM

2 profiles found for the same TF (TFAP4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001151.1 TFAP4 ENCSR103SZL HepG2 Homo sapiens MA0691.1
BP001153.1 TFAP4 ENCSR784IMK K562 Homo sapiens MA0691.1
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