Detailed information of deep learning profile BP001152.1

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This page shows detailed deep learning-derived predictions and motifs for TFAP4 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TFAP4
Model ID: BP001152.1
Cell line/tissue: HepG2
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0691.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q01664  
Source: ENCSR587BVQ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.01 0.00 0.00 0.05 0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.07 0.00 0.00 0.05 0.00 0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.05 0.00 0.00 0.06 0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00 0.04 0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2413 2424 2421 2442 2414 2388 2330 2414 2449 2473 2488 2275 2733 2383 2584 3437 4107 3533 2 10300 6 108 23 4 2110 1788 2134 2000 1972 2103 2279 2176 2285 2324 2343 2364 2191 2285 2315 2459 2285 2282 2433 2275 2263 2363 2355 2348 2344 2382 ]
C [ 2713 2666 2732 2713 2710 2619 2749 2613 2513 2746 2696 2792 2424 2380 2620 1726 2461 2134 10322 8 208 10070 19 8 1175 2374 2893 3030 2936 2744 2606 2797 2650 2559 2770 2722 2817 2924 2904 2667 2851 2835 2741 2758 2815 2753 2789 2729 2782 2799 ]
G [ 2875 2833 2771 2818 2861 2850 2826 2709 2956 2837 2334 3025 2430 3089 2688 2937 2555 1044 1 17 9978 143 7 10312 4826 3674 3160 3093 3161 3441 3349 3102 3286 3214 3037 3006 3026 2954 2834 2985 2838 2936 2770 2962 2890 2869 2844 2823 2859 2802 ]
T [ 2325 2403 2402 2353 2341 2469 2421 2590 2408 2270 2808 2234 2739 2474 2434 2226 1203 3615 1 1 134 5 10277 2 2215 2490 2139 2203 2257 2038 2092 2251 2105 2229 2176 2234 2292 2163 2273 2215 2352 2273 2382 2331 2358 2341 2338 2426 2341 2343 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.00 0.01 0.01 -0.01 0.05 -0.03 -0.00 -0.02 -0.02 0.01 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.01 0.01 0.01 0.07 -0.01 0.01 0.05 0.01 -0.02 -0.00 0.02 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.01 -0.00 -0.03 0.00 0.05 0.01 -0.01 0.06 0.01 0.01 0.01 0.01 0.01 0.01 ]
T [ 0.00 -0.00 0.00 0.00 -0.01 0.01 -0.02 -0.02 -0.00 -0.03 0.04 -0.01 0.01 0.01 0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 6992

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3839

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2839

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 2338

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1424

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 951

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 896

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 645

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 400

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 356

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 290

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 56

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 20

CWM

PFM

     

HCWM

2 profiles found for the same TF (TFAP4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001151.1 TFAP4 ENCSR103SZL HepG2 Homo sapiens MA0691.1
BP001153.1 TFAP4 ENCSR784IMK K562 Homo sapiens MA0691.1
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