Detailed information of deep learning profile BP001151.1

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This page shows detailed deep learning-derived predictions and motifs for TFAP4 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TFAP4
Model ID: BP001151.1
Cell line/tissue: HepG2
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0691.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q01664  
Source: ENCSR103SZL
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.01 0.00 0.00 0.06 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.08 0.00 0.00 0.05 0.00 0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.05 0.00 0.00 0.07 0.01 0.00 0.00 0.00 ]
T [ 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.05 0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2638 2583 2561 2644 2620 2707 2514 2568 2509 2607 2652 2671 2554 2487 2762 2515 2571 3814 5142 3394 0 11625 3 180 9 1 2154 2373 2689 2338 2241 2562 2442 2704 2491 2677 2699 2613 2533 2649 2617 2648 2541 2537 2654 2535 2483 2578 2576 2625 ]
C [ 3037 3103 3253 3129 3203 3106 3100 3117 3259 3209 3107 3238 3213 3346 2845 2754 3138 2415 2574 2135 11644 0 419 11180 35 0 1221 2697 3383 3314 3221 2954 3122 2894 3014 2961 3051 3057 3274 3181 3131 3038 3191 3248 3161 3043 3170 3133 3206 3107 ]
G [ 3250 3372 3254 3248 3336 3259 3454 3407 3241 3044 3351 3175 3036 3350 3100 3771 3353 3239 2856 1826 0 17 10993 284 4 11640 5782 4440 3311 3344 3540 3760 3594 3407 3779 3568 3470 3559 3301 3301 3329 3461 3236 3258 3223 3416 3372 3307 3301 3268 ]
T [ 2719 2586 2576 2623 2485 2572 2576 2552 2635 2784 2534 2560 2841 2461 2937 2604 2582 2176 1072 4289 0 2 229 0 11596 3 2487 2134 2261 2648 2642 2368 2486 2639 2360 2438 2424 2415 2536 2513 2567 2497 2676 2601 2606 2650 2619 2626 2561 2644 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 0.02 0.01 -0.02 0.06 -0.05 -0.00 -0.03 -0.03 0.01 -0.01 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.01 0.02 0.08 -0.02 0.01 0.06 0.00 -0.03 -0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 -0.01 -0.03 0.00 0.05 0.01 -0.02 0.07 0.02 0.01 0.01 0.01 ]
T [ 0.00 0.00 0.00 -0.01 0.01 -0.02 -0.03 -0.00 -0.04 0.05 -0.02 0.01 0.01 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2601

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2588

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 509

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 506

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 233

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 139

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 76

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 65

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 21

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 20

CWM

PFM

     

HCWM

2 profiles found for the same TF (TFAP4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001152.1 TFAP4 ENCSR587BVQ HepG2 Homo sapiens MA0691.1
BP001153.1 TFAP4 ENCSR784IMK K562 Homo sapiens MA0691.1
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