Detailed information of deep learning profile BP001135.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF384 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF384
Model ID: BP001135.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1125.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8TF68  
Source: ENCSR101FJU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.01 0.01 0.02 0.03 0.04 0.06 0.07 0.08 0.08 0.07 0.06 0.05 0.03 0.02 0.02 0.01 0.01 0.01 ]
C [ 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 2795 2763 2642 2645 2618 2475 2437 2267 2119 2028 1993 2031 2292 2713 3197 3839 4385 5012 5451 6040 6734 7715 7754 7759 7762 7754 7756 7462 5990 5293 4839 4404 4113 3804 3592 3301 3123 2998 2964 2849 2926 2833 2674 2597 2567 2535 2512 2397 2476 2328 ]
C [ 1544 1560 1612 1754 1797 1908 1915 2086 2067 2152 2191 2099 1960 1923 1751 1388 1104 657 477 222 97 7 5 1 1 6 5 124 502 705 860 984 1064 1204 1241 1295 1272 1384 1393 1462 1412 1455 1433 1496 1526 1609 1602 1600 1602 1620 ]
G [ 1994 2039 1939 1824 1768 1600 1498 1402 1382 1310 1230 1307 1327 1123 1082 975 938 951 889 803 740 36 3 1 0 0 0 71 524 914 1156 1330 1386 1423 1536 1621 1715 1732 1733 1676 1607 1705 1688 1819 1809 1736 1733 1769 1723 1798 ]
T [ 1430 1401 1570 1540 1580 1780 1913 2008 2195 2273 2349 2326 2184 2004 1733 1561 1336 1143 946 698 192 5 1 2 0 3 2 106 747 851 908 1045 1200 1332 1394 1546 1653 1649 1673 1776 1818 1770 1968 1851 1861 1883 1916 1997 1962 2017 ]

Hypothetical CWM

   
A [ 0.01 0.01 0.02 0.02 0.03 0.05 0.06 0.07 0.08 0.08 0.07 0.06 0.05 0.04 0.03 0.02 0.02 0.01 ]
C [ 0.01 0.00 -0.00 -0.01 -0.01 -0.02 -0.03 -0.04 -0.04 -0.04 -0.03 -0.03 -0.02 -0.01 -0.00 0.00 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.00 0.00 -0.00 -0.01 -0.02 -0.02 -0.03 -0.03 -0.02 -0.01 -0.01 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.02 -0.02 -0.03 -0.03 -0.02 -0.02 -0.01 -0.01 -0.01 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2770

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1446

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 913

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 764

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 607

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 565

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 412

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 406

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 402

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 327

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 130

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 111

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 83

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 35

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 21

CWM

PFM

     

HCWM

3 profiles found for the same TF (ZNF384) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001133.1 ZNF384 ENCSR000DYP GM12878 Homo sapiens MA1125.2
BP001134.1 ZNF384 ENCSR000EFP K562 Homo sapiens MA1125.2
BP001136.1 ZNF384 ENCSR882ICT HEK293T Homo sapiens MA1125.2
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