Detailed information of deep learning profile BP001134.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF384 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF384
Model ID: BP001134.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1125.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8TF68  
Source: ENCSR000EFP
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
T [ 0.00 0.01 0.02 0.03 0.04 0.06 0.08 0.10 0.10 0.10 0.09 0.07 0.05 0.04 0.03 0.02 0.01 0.01 0.00 ]

Frequency matrix

       
A [ 2238 2207 2164 2149 2129 2110 2120 2092 2137 2029 1935 1850 1837 1748 1743 1592 1553 1387 1168 932 724 78 1 0 1 3 4 18 229 715 972 1132 1372 1654 2011 2216 2557 2585 2709 2527 2554 2249 2108 2046 1762 1654 1581 1513 1519 1482 ]
C [ 2140 2136 2164 2179 2184 2191 2124 2214 2095 2179 2231 2318 2263 2279 2174 2163 1985 1998 1684 1186 593 91 2 0 1 1 10 48 755 849 978 982 1035 1168 1233 1274 1354 1494 1390 1508 1534 1537 1657 1797 1981 2180 2318 2437 2385 2392 ]
G [ 1823 1848 1893 1765 1800 1801 1732 1706 1661 1717 1653 1688 1748 1756 1643 1702 1332 1093 974 705 509 148 5 1 0 0 0 3 125 311 512 783 1080 1504 1833 2202 2427 2634 2746 2747 2489 2618 2428 2348 2243 2117 1886 1769 1791 1904 ]
T [ 2716 2726 2696 2824 2804 2815 2941 2905 3024 2992 3098 3061 3069 3134 3357 3460 4047 4439 5091 6094 7091 8600 8909 8916 8915 8913 8903 8848 7808 7042 6455 6020 5430 4591 3840 3225 2579 2204 2072 2135 2340 2513 2724 2726 2931 2966 3132 3198 3222 3139 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.00 -0.01 -0.02 -0.02 -0.03 -0.03 -0.03 -0.03 -0.03 -0.02 -0.02 -0.01 -0.01 -0.00 0.00 0.00 ]
C [ 0.01 0.01 0.01 -0.00 -0.01 -0.03 -0.04 -0.05 -0.05 -0.04 -0.03 -0.02 -0.01 -0.01 -0.00 0.00 0.01 0.01 ]
G [ 0.02 0.01 0.01 0.00 -0.01 -0.02 -0.03 -0.04 -0.05 -0.05 -0.04 -0.04 -0.03 -0.02 -0.01 -0.00 0.00 0.01 ]
T [ 0.01 0.01 0.02 0.03 0.05 0.07 0.08 0.10 0.10 0.10 0.09 0.07 0.06 0.04 0.03 0.02 0.02 0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4295

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1728

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1392

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 833

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 497

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 229

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 168

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 127

CWM

PFM

     

HCWM

3 profiles found for the same TF (ZNF384) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001133.1 ZNF384 ENCSR000DYP GM12878 Homo sapiens MA1125.2
BP001135.1 ZNF384 ENCSR101FJU HepG2 Homo sapiens MA1125.2
BP001136.1 ZNF384 ENCSR882ICT HEK293T Homo sapiens MA1125.2
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