Detailed information of deep learning profile BP001135.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF384 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF384
Model ID: BP001135.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1125.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8TF68  
Source: ENCSR101FJU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 ]
T [ 0.01 0.01 0.01 0.02 0.02 0.03 0.05 0.06 0.07 0.08 0.08 0.07 0.06 0.04 0.03 0.02 0.01 0.01 0.00 ]

Frequency matrix

       
A [ 2017 1962 1997 1916 1883 1861 1851 1968 1770 1818 1776 1673 1649 1653 1546 1394 1332 1200 1045 908 851 747 106 2 3 0 2 1 5 192 698 946 1143 1336 1561 1733 2004 2184 2326 2349 2273 2195 2008 1913 1780 1580 1540 1570 1401 1430 ]
C [ 1798 1723 1769 1733 1736 1809 1819 1688 1705 1607 1676 1733 1732 1715 1621 1536 1423 1386 1330 1156 914 524 71 0 0 0 1 3 36 740 803 889 951 938 975 1082 1123 1327 1307 1230 1310 1382 1402 1498 1600 1768 1824 1939 2039 1994 ]
G [ 1620 1602 1600 1602 1609 1526 1496 1433 1455 1412 1462 1393 1384 1272 1295 1241 1204 1064 984 860 705 502 124 5 6 1 1 5 7 97 222 477 657 1104 1388 1751 1923 1960 2099 2191 2152 2067 2086 1915 1908 1797 1754 1612 1560 1544 ]
T [ 2328 2476 2397 2512 2535 2567 2597 2674 2833 2926 2849 2964 2998 3123 3301 3592 3804 4113 4404 4839 5293 5990 7462 7756 7754 7762 7759 7754 7715 6734 6040 5451 5012 4385 3839 3197 2713 2292 2031 1993 2028 2119 2267 2437 2475 2618 2645 2642 2763 2795 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.02 -0.02 -0.03 -0.03 -0.02 -0.02 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 -0.01 -0.01 -0.02 -0.03 -0.03 -0.02 -0.02 -0.01 -0.00 0.00 0.00 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.00 -0.00 -0.01 -0.02 -0.03 -0.03 -0.04 -0.04 -0.04 -0.03 -0.02 -0.01 -0.01 -0.00 0.00 0.01 ]
T [ 0.01 0.02 0.02 0.03 0.04 0.05 0.06 0.07 0.08 0.08 0.07 0.06 0.05 0.03 0.02 0.02 0.01 0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2770

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1446

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 913

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 764

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 607

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 565

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 412

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 406

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 402

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 327

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 130

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 111

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 83

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 35

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 21

CWM

PFM

     

HCWM

3 profiles found for the same TF (ZNF384) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001133.1 ZNF384 ENCSR000DYP GM12878 Homo sapiens MA1125.2
BP001134.1 ZNF384 ENCSR000EFP K562 Homo sapiens MA1125.2
BP001136.1 ZNF384 ENCSR882ICT HEK293T Homo sapiens MA1125.2
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