Detailed information of deep learning profile BP001134.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF384 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF384
Model ID: BP001134.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1125.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8TF68  
Source: ENCSR000EFP
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.01 0.01 0.02 0.03 0.04 0.05 0.07 0.09 0.10 0.10 0.10 0.08 0.06 0.04 0.03 0.02 0.01 0.00 ]
C [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 3139 3222 3198 3132 2966 2931 2726 2724 2513 2340 2135 2072 2204 2579 3225 3840 4591 5430 6020 6455 7042 7808 8848 8903 8913 8915 8916 8909 8600 7091 6094 5091 4439 4047 3460 3357 3134 3069 3061 3098 2992 3024 2905 2941 2815 2804 2824 2696 2726 2716 ]
C [ 1904 1791 1769 1886 2117 2243 2348 2428 2618 2489 2747 2746 2634 2427 2202 1833 1504 1080 783 512 311 125 3 0 0 0 1 5 148 509 705 974 1093 1332 1702 1643 1756 1748 1688 1653 1717 1661 1706 1732 1801 1800 1765 1893 1848 1823 ]
G [ 2392 2385 2437 2318 2180 1981 1797 1657 1537 1534 1508 1390 1494 1354 1274 1233 1168 1035 982 978 849 755 48 10 1 1 0 2 91 593 1186 1684 1998 1985 2163 2174 2279 2263 2318 2231 2179 2095 2214 2124 2191 2184 2179 2164 2136 2140 ]
T [ 1482 1519 1513 1581 1654 1762 2046 2108 2249 2554 2527 2709 2585 2557 2216 2011 1654 1372 1132 972 715 229 18 4 3 1 0 1 78 724 932 1168 1387 1553 1592 1743 1748 1837 1850 1935 2029 2137 2092 2120 2110 2129 2149 2164 2207 2238 ]

Hypothetical CWM

   
A [ 0.01 0.02 0.02 0.03 0.04 0.06 0.07 0.09 0.10 0.10 0.10 0.08 0.07 0.05 0.03 0.02 0.01 0.01 ]
C [ 0.01 0.00 -0.00 -0.01 -0.02 -0.03 -0.04 -0.04 -0.05 -0.05 -0.04 -0.03 -0.02 -0.01 0.00 0.01 0.01 0.02 ]
G [ 0.01 0.01 0.00 -0.00 -0.01 -0.01 -0.02 -0.03 -0.04 -0.05 -0.05 -0.04 -0.03 -0.01 -0.00 0.01 0.01 0.01 ]
T [ 0.00 0.00 -0.00 -0.01 -0.01 -0.02 -0.02 -0.03 -0.03 -0.03 -0.03 -0.03 -0.02 -0.02 -0.01 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4295

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1728

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1392

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 833

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 497

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 229

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 168

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 127

CWM

PFM

     

HCWM

3 profiles found for the same TF (ZNF384) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001133.1 ZNF384 ENCSR000DYP GM12878 Homo sapiens MA1125.2
BP001135.1 ZNF384 ENCSR101FJU HepG2 Homo sapiens MA1125.2
BP001136.1 ZNF384 ENCSR882ICT HEK293T Homo sapiens MA1125.2
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