Detailed information of deep learning profile BP001118.1

  1. Home
  2. Deep Learning Profile > BP001118.1
This page shows detailed deep learning-derived predictions and motifs for NFYB in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NFYB
Model ID: BP001118.1
Cell line/tissue: K562
Class: Heteromeric CCAAT-binding factors
Family: Heteromeric CCAAT-binding
JASPAR ID: MA0502.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P25208  
Source: ENCSR000EGQ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.01 0.01 -0.00 -0.00 0.11 0.12 -0.00 -0.00 0.03 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.00 -0.00 0.13 0.11 -0.00 -0.00 0.00 0.03 -0.00 -0.00 0.01 -0.00 0.00 0.00 0.01 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 ]
G [ -0.00 0.00 0.01 0.01 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.01 0.02 -0.00 0.01 0.01 0.00 0.00 0.00 0.02 0.00 0.04 0.01 0.01 0.00 0.01 ]
T [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.14 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 3940 5127 5175 7424 5304 2013 2207 4277 2917 1747 3432 7448 10129 9881 9923 1401 2181 5334 11488 5 37 18789 18681 16 1007 14520 1685 5249 8491 1893 1771 4081 3095 1966 2451 5086 5798 6389 6141 6448 2727 3128 4745 5433 4357 8042 6870 5170 2935 6271 ]
C [ 8362 4348 6334 5703 4296 5554 4289 6323 3762 4617 4313 3097 3137 3796 3846 6421 4840 4971 625 18974 18931 23 65 124 14308 790 2350 9512 1117 8696 4887 9653 2804 3465 3200 3016 3043 4677 3172 2974 3900 4961 3209 7332 8783 4602 3217 3688 5702 4671 ]
G [ 4076 4703 5463 3008 5667 7308 6936 3119 4213 5412 5658 3011 4192 2768 2621 2488 8961 7948 5782 19 58 20 288 6 3191 3618 14252 2276 6304 6131 5247 3313 3475 11889 3428 9216 5734 5972 4098 5787 9733 8494 6369 3667 3445 3732 6378 5231 3588 3763 ]
T [ 2678 4878 2084 2921 3789 4181 5624 5337 8164 7280 5653 5500 1598 2611 2666 8746 3074 803 1161 58 30 224 22 18910 550 128 769 2019 3144 2336 7151 2009 9682 1736 9977 1738 4481 2018 5645 3847 2696 2473 4733 2624 2471 2680 2591 4967 6831 4351 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.01 -0.01 -0.03 0.03 0.03 -0.07 -0.04 0.11 0.12 -0.06 0.00 0.05 0.01 0.02 0.01 0.01 -0.00 0.00 0.01 -0.01 -0.01 -0.04 -0.01 -0.01 -0.01 -0.01 ]
C [ 0.02 0.02 0.02 0.04 0.05 0.01 -0.02 0.13 0.11 -0.08 -0.05 0.03 0.05 -0.01 0.02 0.02 0.00 0.01 0.03 0.02 0.01 0.02 0.02 0.02 0.02 0.02 0.02 0.02 ]
G [ 0.02 0.02 0.02 0.01 0.01 0.04 0.04 -0.04 0.00 -0.02 0.00 -0.10 0.01 0.06 0.03 0.01 0.03 0.03 0.02 0.03 0.02 0.03 0.03 0.07 0.03 0.03 0.02 0.02 ]
T [ -0.00 0.00 0.01 0.02 0.01 -0.03 0.00 -0.01 -0.04 0.01 -0.05 0.14 -0.01 -0.07 -0.00 -0.00 0.01 0.01 0.01 -0.00 -0.00 -0.00 -0.00 -0.03 -0.01 -0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 96

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 70

CWM

PFM

     

HCWM

4 profiles found for the same TF (NFYB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001116.1 NFYB ENCSR000DNM GM12878 Homo sapiens MA0502.3
BP001117.1 NFYB ENCSR000DNR HeLa-S3 Homo sapiens MA0502.3
BP001119.1 NFYB ENCSR146UIC WTC11 Homo sapiens MA0502.3
BP001120.1 NFYB ENCSR935GZV HepG2 Homo sapiens MA0502.3
Showing 4 profiles of page 1 from 1 pages
  • 1 (current)