JASPAR - NFYB - BP001117.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for NFYB in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	NFYB
Model ID:	BP001117.1
Cell line/tissue:	HeLa-S3
Class:	Heteromeric CCAAT-binding factors
Family:	Heteromeric CCAAT-binding
JASPAR ID:	MA0502.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P25208
Source:	ENCSR000DNR
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 10695

Contribution weight matrix (CWM)

A [	-0.00	-0.00	0.01	0.01	0.00	-0.00	0.10	0.10	-0.00	-0.00	0.02	0.00	0.00	0.00	-0.00	]
C [	0.00	0.01	-0.00	-0.00	0.10	0.08	-0.00	-0.00	0.00	0.02	-0.00	-0.00	0.00	-0.00	-0.00	]
G [	-0.00	-0.00	0.01	0.01	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.01	0.01	-0.00	0.01	0.00	]
T [	0.00	0.00	-0.00	-0.00	0.00	-0.00	0.00	0.00	0.12	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	]

Frequency matrix

A [	2340	3016	3135	2552	1512	1772	2305	1987	1511	2184	3219	3782	3611	3697	1137	1099	4122	4691	4	38	10411	10414	10	985	6848	1454	3942	3885	1560	1479	2154	2479	1476	1911	2068	2275	2582	2401	2950	1866	1923	2270	2663	2551	3218	2652	2459	1942	2550	2457	]
C [	3114	3354	3143	2721	2831	2560	3324	2815	3162	3027	2535	2529	2982	2771	3603	3659	2004	581	10615	10549	16	65	111	6586	743	1920	3596	885	3675	3229	4503	1985	2641	2407	1868	2482	2899	2397	2219	2510	3111	2368	3265	3584	2735	2575	2607	3049	2856	2710	]
G [	2990	2750	2273	3182	3859	3780	2408	2699	2867	2990	2349	3069	2016	2201	1955	3557	4093	4446	22	72	9	182	3	2679	2975	6631	1909	4185	3706	3084	2576	2797	5201	2726	5379	3290	3565	3089	3573	4458	3875	3361	2879	2680	2720	3540	3284	2801	2818	2963	]
T [	2251	1575	2144	2240	2493	2583	2658	3194	3155	2494	2592	1315	2086	2026	4000	2380	476	977	54	36	259	34	10571	445	129	690	1248	1740	1754	2903	1462	3434	1377	3651	1380	2648	1649	2808	1953	1861	1786	2696	1888	1880	2022	1928	2345	2903	2471	2565	]

Hypothetical CWM

A [	0.00	0.01	-0.01	-0.02	0.03	0.03	-0.06	-0.04	0.10	0.10	-0.05	0.00	0.04	0.01	0.01	0.01	0.01	-0.00	0.00	0.01	-0.01	-0.00	-0.02	-0.01	-0.00	-0.00	-0.00	]
C [	0.01	0.01	0.02	0.03	-0.00	-0.02	0.10	0.08	-0.07	-0.04	0.02	0.03	-0.01	0.01	0.01	-0.00	0.01	0.01	0.01	0.00	0.01	0.01	0.01	0.01	0.01	0.01	0.01	]
G [	0.01	0.01	0.00	0.01	0.03	0.02	-0.04	0.00	-0.02	-0.01	-0.08	0.01	0.05	0.02	0.00	0.02	0.02	0.01	0.01	0.02	0.02	0.01	0.04	0.02	0.02	0.01	0.01	]
T [	0.01	0.01	0.01	0.01	-0.02	0.01	0.00	-0.02	0.01	-0.04	0.12	-0.01	-0.05	0.00	0.00	0.01	0.00	0.01	-0.00	-0.00	-0.00	0.00	-0.02	-0.01	-0.00	0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 26

CWM

PFM

HCWM

4 profiles found for the same TF (NFYB) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001116.1	NFYB	ENCSR000DNM	GM12878	Homo sapiens	MA0502.3
BP001118.1	NFYB	ENCSR000EGQ	K562	Homo sapiens	MA0502.3
BP001119.1	NFYB	ENCSR146UIC	WTC11	Homo sapiens	MA0502.3
BP001120.1	NFYB	ENCSR935GZV	HepG2	Homo sapiens	MA0502.3