JASPAR - NFYA - BP001104.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for NFYA in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	NFYA
Model ID:	BP001104.1
Cell line/tissue:	HepG2
Class:	Heteromeric CCAAT-binding factors
Family:	Heteromeric CCAAT-binding
JASPAR ID:	MA0060.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P23511
Source:	ENCSR124APT
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 8943

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	-0.00	0.09	-0.00	0.00	-0.00	0.00	-0.00	-0.00	0.00	0.00	]
C [	-0.00	0.01	0.01	-0.00	0.00	-0.00	0.00	-0.00	-0.00	0.01	0.01	-0.00	-0.00	]
G [	0.00	-0.00	-0.00	0.01	0.00	-0.00	-0.00	0.06	0.07	-0.00	-0.00	0.01	0.00	]
T [	0.00	-0.00	0.01	-0.00	-0.00	0.07	0.07	-0.00	-0.00	0.00	0.01	-0.00	-0.00	]

Frequency matrix

A [	1700	1836	1695	1511	1481	1537	1480	1800	1416	1425	1510	1861	1478	2172	1719	1834	1049	1952	1207	1582	1280	1316	786	569	91	323	8759	45	209	34	91	861	447	1931	2780	1616	1718	1087	1801	1769	2110	2061	1914	1774	1729	1745	1735	1275	1561	1612	]
C [	2611	2830	2908	3171	2810	2604	2833	3043	3272	3540	3263	3125	3313	2469	3151	2835	4042	3152	2607	2940	3283	3964	2008	5158	3176	2490	2	154	13	76	17	4459	3559	2254	2046	2300	2082	3000	2362	2702	2544	2515	2271	3030	3457	2969	2305	2380	2811	2756	]
G [	2880	2901	2713	2421	2688	3059	2801	2446	2575	2460	2237	2340	2379	2551	1893	2687	2653	1971	3703	3215	2959	842	2745	1982	829	5304	163	64	12	8808	8831	668	1371	3861	3030	2581	2986	2567	2715	2886	2910	2563	3087	2515	2508	2570	2809	3050	2794	3014	]
T [	1752	1376	1627	1840	1964	1743	1829	1654	1680	1518	1933	1617	1773	1751	2180	1587	1199	1868	1426	1206	1421	2821	3404	1234	4847	826	19	8680	8709	25	4	2955	3566	897	1087	2446	2157	2289	2065	1586	1379	1804	1671	1624	1249	1659	2094	2238	1777	1561	]

Hypothetical CWM

A [	-0.00	0.01	0.00	-0.00	-0.04	-0.01	0.09	-0.01	0.01	-0.02	0.00	0.00	-0.02	0.01	0.01	0.00	0.01	]
C [	0.01	0.02	0.00	0.02	0.03	0.00	-0.06	-0.01	-0.01	-0.00	-0.03	0.02	0.02	0.00	0.00	0.01	0.01	]
G [	0.01	-0.00	0.01	0.00	-0.01	0.03	0.01	-0.03	-0.05	0.06	0.07	-0.01	-0.00	0.02	0.01	0.00	0.01	]
T [	0.00	0.01	0.01	0.00	0.03	0.00	-0.03	0.07	0.07	-0.03	-0.05	0.02	0.02	-0.01	-0.00	0.01	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 217

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 117

CWM

PFM

HCWM

4 profiles found for the same TF (NFYA) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001101.1	NFYA	ENCSR000DNN	GM12878	Homo sapiens	MA0060.4
BP001102.1	NFYA	ENCSR000DNS	HeLa-S3	Homo sapiens	MA0060.4
BP001103.1	NFYA	ENCSR000EGR	K562	Homo sapiens	MA0060.4
BP001105.1	NFYA	ENCSR163VTS	K562	Homo sapiens	MA0060.4