Detailed information of deep learning profile BP001101.1

This page shows detailed deep learning-derived predictions and motifs for NFYA in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NFYA
Model ID: BP001101.1
Cell line/tissue: GM12878
Class: Heteromeric CCAAT-binding factors
Family: Heteromeric CCAAT-binding
JASPAR ID: MA0060.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P23511  
Source: ENCSR000DNN
Model: BPNet
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Contribution weight matrix (CWM)

A [ -0.00 0.00 0.00 0.00 -0.00 0.00 0.04 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.02 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 ]
G [ -0.00 -0.00 0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 0.02 0.02 -0.00 -0.00 0.01 0.00 ]
T [ 0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.04 0.03 -0.00 -0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

A [ 174 199 193 230 193 184 195 190 188 190 187 192 191 278 218 163 142 155 144 193 138 145 171 80 1 88 1062 20 6 36 45 146 77 326 338 236 221 122 206 219 257 237 209 219 200 242 240 188 160 207 ]
C [ 329 342 396 364 353 348 372 352 348 390 392 454 408 272 379 343 432 441 340 351 456 488 157 597 595 288 0 5 27 31 10 529 404 148 231 298 253 384 302 308 348 329 287 324 469 337 303 292 369 348 ]
G [ 364 357 305 285 311 321 280 288 297 289 278 270 284 317 189 299 330 249 400 362 231 102 319 185 24 556 7 1 2 999 1015 70 95 516 373 245 393 361 342 333 290 269 397 305 241 303 317 285 320 325 ]
T [ 205 174 178 193 215 219 225 242 239 203 215 156 189 205 286 267 168 227 188 166 247 337 425 210 452 140 3 1046 1037 6 2 327 496 82 130 293 205 205 222 212 177 237 179 224 162 190 212 307 223 192 ]

Hypothetical CWM

A [ -0.01 -0.00 -0.01 -0.00 0.01 -0.01 -0.04 0.00 0.04 0.01 -0.02 -0.00 0.01 -0.01 -0.01 0.01 0.01 -0.01 -0.01 -0.01 ]
C [ -0.00 -0.00 0.00 0.00 -0.02 0.00 0.03 -0.01 -0.04 -0.02 0.02 -0.00 -0.03 0.01 0.01 -0.01 -0.01 0.00 0.00 -0.00 ]
G [ 0.00 -0.00 -0.01 -0.01 0.01 -0.01 -0.02 0.01 0.00 -0.03 -0.04 0.02 0.02 -0.02 -0.01 0.01 0.00 -0.01 -0.00 0.01 ]
T [ -0.01 -0.01 0.01 -0.00 -0.01 0.00 0.01 -0.01 -0.01 0.04 0.03 -0.03 -0.03 0.01 0.01 -0.02 -0.01 0.00 -0.01 -0.02 ]

4 profiles found for the same TF (NFYA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001102.1 NFYA ENCSR000DNS HeLa-S3 Homo sapiens MA0060.4
BP001103.1 NFYA ENCSR000EGR K562 Homo sapiens MA0060.4
BP001104.1 NFYA ENCSR124APT HepG2 Homo sapiens MA0060.4
BP001105.1 NFYA ENCSR163VTS K562 Homo sapiens MA0060.4
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