JASPAR - NFYA - BP001104.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for NFYA in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	NFYA
Model ID:	BP001104.1
Cell line/tissue:	HepG2
Class:	Heteromeric CCAAT-binding factors
Family:	Heteromeric CCAAT-binding
JASPAR ID:	MA0060.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P23511
Source:	ENCSR124APT
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 8943

Contribution weight matrix (CWM)

A [	-0.00	-0.00	0.01	0.00	-0.00	-0.00	0.07	0.07	-0.00	-0.00	0.01	-0.00	0.00	]
C [	0.00	0.01	-0.00	-0.00	0.07	0.06	-0.00	-0.00	0.00	0.01	-0.00	-0.00	0.00	]
G [	-0.00	-0.00	0.01	0.01	-0.00	-0.00	0.00	-0.00	0.00	-0.00	0.01	0.01	-0.00	]
T [	0.00	0.00	-0.00	-0.00	0.00	-0.00	0.00	-0.00	0.09	-0.00	-0.00	-0.00	-0.00	]

Frequency matrix

A [	1561	1777	2238	2094	1659	1249	1624	1671	1804	1379	1586	2065	2289	2157	2446	1087	897	3566	2955	4	25	8709	8680	19	826	4847	1234	3404	2821	1421	1206	1426	1868	1199	1587	2180	1751	1773	1617	1933	1518	1680	1654	1829	1743	1964	1840	1627	1376	1752	]
C [	3014	2794	3050	2809	2570	2508	2515	3087	2563	2910	2886	2715	2567	2986	2581	3030	3861	1371	668	8831	8808	12	64	163	5304	829	1982	2745	842	2959	3215	3703	1971	2653	2687	1893	2551	2379	2340	2237	2460	2575	2446	2801	3059	2688	2421	2713	2901	2880	]
G [	2756	2811	2380	2305	2969	3457	3030	2271	2515	2544	2702	2362	3000	2082	2300	2046	2254	3559	4459	17	76	13	154	2	2490	3176	5158	2008	3964	3283	2940	2607	3152	4042	2835	3151	2469	3313	3125	3263	3540	3272	3043	2833	2604	2810	3171	2908	2830	2611	]
T [	1612	1561	1275	1735	1745	1729	1774	1914	2061	2110	1769	1801	1087	1718	1616	2780	1931	447	861	91	34	209	45	8759	323	91	569	786	1316	1280	1582	1207	1952	1049	1834	1719	2172	1478	1861	1510	1425	1416	1800	1480	1537	1481	1511	1695	1836	1700	]

Hypothetical CWM

A [	-0.00	0.01	-0.00	-0.01	0.02	0.02	-0.05	-0.03	0.07	0.07	-0.03	0.00	0.03	0.00	0.01	0.01	0.00	]
C [	0.01	0.00	0.01	0.02	-0.00	-0.01	0.07	0.06	-0.05	-0.03	0.01	0.03	-0.01	0.00	0.01	-0.00	0.01	]
G [	0.01	0.01	0.00	0.00	0.02	0.02	-0.03	-0.00	-0.01	-0.01	-0.06	0.00	0.03	0.02	0.00	0.02	0.01	]
T [	0.01	0.00	0.01	0.01	-0.02	0.00	0.00	-0.02	0.01	-0.01	0.09	-0.01	-0.04	-0.00	0.00	0.01	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 217

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 117

CWM

PFM

HCWM

4 profiles found for the same TF (NFYA) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001101.1	NFYA	ENCSR000DNN	GM12878	Homo sapiens	MA0060.4
BP001102.1	NFYA	ENCSR000DNS	HeLa-S3	Homo sapiens	MA0060.4
BP001103.1	NFYA	ENCSR000EGR	K562	Homo sapiens	MA0060.4
BP001105.1	NFYA	ENCSR163VTS	K562	Homo sapiens	MA0060.4