Detailed information of deep learning profile BP001102.1

This page shows detailed deep learning-derived predictions and motifs for NFYA in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NFYA
Model ID: BP001102.1
Cell line/tissue: HeLa-S3
Class: Heteromeric CCAAT-binding factors
Family: Heteromeric CCAAT-binding
JASPAR ID: MA0060.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P23511  
Source: ENCSR000DNS
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 0.01 0.00 -0.00 -0.00 0.09 0.09 -0.00 -0.00 0.02 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.01 -0.00 -0.00 0.08 0.07 -0.00 -0.00 0.00 0.01 -0.00 -0.00 0.00 -0.00 -0.00 ]
G [ -0.00 -0.00 0.01 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.02 0.01 -0.00 0.01 0.00 ]
T [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.11 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

A [ 1361 1533 2020 1571 1394 1103 1379 1313 1519 1209 1437 1768 1688 1576 1746 949 670 3178 2253 4 19 7243 7230 1 761 3957 1083 3004 2232 1182 1122 1217 1693 1061 1438 1759 1475 1503 1318 1525 1356 1459 1515 1502 1469 1584 1497 1336 1250 1428 ]
C [ 2280 2449 2236 2399 2141 2091 1980 2592 2206 2409 2483 2345 2273 2608 2234 2461 3135 917 581 7325 7338 9 69 67 4132 688 1681 1967 714 2220 2459 2894 1676 2280 2252 1497 2132 1849 2052 1866 2043 2070 2058 2093 2351 2225 2119 2213 2420 2369 ]
G [ 2381 2349 2032 1960 2329 2669 2479 1954 2123 2195 2037 2000 2488 1718 1996 1702 1822 2981 3807 10 53 5 104 1 2240 2710 4129 1709 3387 2789 2412 2257 2681 3093 2389 2710 2054 2726 2650 2632 2756 2605 2379 2423 2247 2248 2386 2400 2377 2255 ]
T [ 1410 1101 1144 1502 1568 1569 1594 1573 1584 1619 1475 1319 983 1530 1456 2320 1805 356 791 93 22 175 29 7363 299 77 539 752 1099 1241 1439 1064 1382 998 1353 1466 1771 1354 1412 1409 1277 1298 1480 1414 1365 1375 1430 1483 1385 1380 ]

Hypothetical CWM

A [ -0.00 0.01 -0.01 -0.02 0.02 0.03 -0.05 -0.04 0.09 0.09 -0.04 0.00 0.04 0.01 0.01 0.01 0.00 ]
C [ 0.01 0.00 0.02 0.03 0.00 -0.02 0.08 0.07 -0.06 -0.03 0.01 0.03 -0.01 0.00 0.01 -0.01 0.00 ]
G [ 0.01 0.02 0.00 0.00 0.02 0.02 -0.04 -0.00 -0.01 -0.02 -0.07 0.01 0.05 0.02 0.00 0.02 0.02 ]
T [ 0.01 0.01 0.01 0.02 -0.02 0.00 0.01 -0.02 0.00 -0.02 0.11 -0.01 -0.06 0.00 0.00 0.01 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1067

4 profiles found for the same TF (NFYA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001101.1 NFYA ENCSR000DNN GM12878 Homo sapiens MA0060.4
BP001103.1 NFYA ENCSR000EGR K562 Homo sapiens MA0060.4
BP001104.1 NFYA ENCSR124APT HepG2 Homo sapiens MA0060.4
BP001105.1 NFYA ENCSR163VTS K562 Homo sapiens MA0060.4
Showing 4 profiles of page 1 from 1 pages
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