Detailed information of deep learning profile BP001102.1

This page shows detailed deep learning-derived predictions and motifs for NFYA in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NFYA
Model ID: BP001102.1
Cell line/tissue: HeLa-S3
Class: Heteromeric CCAAT-binding factors
Family: Heteromeric CCAAT-binding
JASPAR ID: MA0060.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P23511  
Source: ENCSR000DNS
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.11 -0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
C [ 0.00 0.01 -0.00 0.01 0.02 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 0.01 -0.00 -0.00 ]
G [ -0.00 -0.00 0.00 -0.00 -0.00 0.01 0.00 -0.00 -0.00 0.07 0.08 -0.00 -0.00 0.01 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.02 -0.00 -0.00 0.09 0.09 -0.00 -0.00 0.00 0.01 -0.00 -0.00 ]

Frequency matrix

A [ 1380 1385 1483 1430 1375 1365 1414 1480 1298 1277 1409 1412 1354 1771 1466 1353 998 1382 1064 1439 1241 1099 752 539 77 299 7363 29 175 22 93 791 356 1805 2320 1456 1530 983 1319 1475 1619 1584 1573 1594 1569 1568 1502 1144 1101 1410 ]
C [ 2255 2377 2400 2386 2248 2247 2423 2379 2605 2756 2632 2650 2726 2054 2710 2389 3093 2681 2257 2412 2789 3387 1709 4129 2710 2240 1 104 5 53 10 3807 2981 1822 1702 1996 1718 2488 2000 2037 2195 2123 1954 2479 2669 2329 1960 2032 2349 2381 ]
G [ 2369 2420 2213 2119 2225 2351 2093 2058 2070 2043 1866 2052 1849 2132 1497 2252 2280 1676 2894 2459 2220 714 1967 1681 688 4132 67 69 9 7338 7325 581 917 3135 2461 2234 2608 2273 2345 2483 2409 2206 2592 1980 2091 2141 2399 2236 2449 2280 ]
T [ 1428 1250 1336 1497 1584 1469 1502 1515 1459 1356 1525 1318 1503 1475 1759 1438 1061 1693 1217 1122 1182 2232 3004 1083 3957 761 1 7230 7243 19 4 2253 3178 670 949 1746 1576 1688 1768 1437 1209 1519 1313 1379 1103 1394 1571 2020 1533 1361 ]

Hypothetical CWM

A [ 0.00 0.01 0.00 0.00 -0.06 -0.01 0.11 -0.02 0.00 -0.02 0.01 0.00 -0.02 0.02 0.01 0.01 0.01 ]
C [ 0.02 0.02 0.00 0.02 0.05 0.01 -0.07 -0.02 -0.01 -0.00 -0.04 0.02 0.02 0.00 0.00 0.02 0.01 ]
G [ 0.00 -0.01 0.01 0.00 -0.01 0.03 0.01 -0.03 -0.06 0.07 0.08 -0.02 0.00 0.03 0.02 0.00 0.01 ]
T [ 0.00 0.01 0.01 0.01 0.04 0.00 -0.04 0.09 0.09 -0.04 -0.05 0.03 0.02 -0.02 -0.01 0.01 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1067

4 profiles found for the same TF (NFYA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001101.1 NFYA ENCSR000DNN GM12878 Homo sapiens MA0060.4
BP001103.1 NFYA ENCSR000EGR K562 Homo sapiens MA0060.4
BP001104.1 NFYA ENCSR124APT HepG2 Homo sapiens MA0060.4
BP001105.1 NFYA ENCSR163VTS K562 Homo sapiens MA0060.4
Showing 4 profiles of page 1 from 1 pages
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