Detailed information of deep learning profile BP001101.1

This page shows detailed deep learning-derived predictions and motifs for NFYA in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NFYA
Model ID: BP001101.1
Cell line/tissue: GM12878
Class: Heteromeric CCAAT-binding factors
Family: Heteromeric CCAAT-binding
JASPAR ID: MA0060.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P23511  
Source: ENCSR000DNN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.03 0.04 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 ]
C [ 0.00 0.01 -0.00 -0.00 0.02 0.02 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.00 -0.00 -0.00 ]
G [ -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.02 0.00 -0.00 0.00 0.00 ]
T [ 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.04 0.00 -0.00 0.00 0.00 0.00 -0.00 ]

Frequency matrix

A [ 192 223 307 212 190 162 224 179 237 177 212 222 205 205 293 130 82 496 327 2 6 1037 1046 3 140 452 210 425 337 247 166 188 227 168 267 286 205 189 156 215 203 239 242 225 219 215 193 178 174 205 ]
C [ 325 320 285 317 303 241 305 397 269 290 333 342 361 393 245 373 516 95 70 1015 999 2 1 7 556 24 185 319 102 231 362 400 249 330 299 189 317 284 270 278 289 297 288 280 321 311 285 305 357 364 ]
G [ 348 369 292 303 337 469 324 287 329 348 308 302 384 253 298 231 148 404 529 10 31 27 5 0 288 595 597 157 488 456 351 340 441 432 343 379 272 408 454 392 390 348 352 372 348 353 364 396 342 329 ]
T [ 207 160 188 240 242 200 219 209 237 257 219 206 122 221 236 338 326 77 146 45 36 6 20 1062 88 1 80 171 145 138 193 144 155 142 163 218 278 191 192 187 190 188 190 195 184 193 230 193 199 174 ]

Hypothetical CWM

A [ -0.02 -0.01 0.00 -0.01 -0.02 0.01 0.01 -0.03 -0.03 0.03 0.04 -0.01 -0.01 0.01 0.00 -0.01 -0.00 0.01 -0.01 -0.01 ]
C [ 0.01 -0.00 -0.01 0.00 0.01 -0.01 -0.02 0.02 0.02 -0.04 -0.03 0.00 0.01 -0.02 -0.01 0.01 -0.01 -0.01 -0.00 0.00 ]
G [ -0.00 0.00 0.00 -0.01 -0.01 0.01 0.01 -0.03 -0.00 0.02 -0.02 -0.04 -0.01 0.03 0.00 -0.02 0.00 0.00 -0.00 -0.00 ]
T [ -0.01 -0.01 -0.01 0.01 0.01 -0.01 -0.01 0.01 -0.00 -0.02 0.01 0.04 0.00 -0.04 -0.01 0.01 -0.00 -0.01 -0.00 -0.01 ]

4 profiles found for the same TF (NFYA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001102.1 NFYA ENCSR000DNS HeLa-S3 Homo sapiens MA0060.4
BP001103.1 NFYA ENCSR000EGR K562 Homo sapiens MA0060.4
BP001104.1 NFYA ENCSR124APT HepG2 Homo sapiens MA0060.4
BP001105.1 NFYA ENCSR163VTS K562 Homo sapiens MA0060.4
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