Detailed information of deep learning profile BP001088.1

This page shows detailed deep learning-derived predictions and motifs for IKZF1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: IKZF1
Model ID: BP001088.1
Cell line/tissue: GM12878
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
JASPAR ID: MA1508.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13422  
Source: ENCSR874AFU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 0.00 -0.00 -0.00 0.02 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 -0.00 0.02 0.00 0.00 0.04 0.04 0.00 0.01 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.03 0.04 0.00 0.00 0.00 -0.00 0.01 0.02 0.01 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

A [ 1640 1515 1569 1602 1697 1633 1575 1652 1559 1561 1531 1653 1941 1772 1468 1471 1443 721 982 5015 51 101 1 0 2 65 129 1155 452 452 480 1069 1371 1501 1581 1559 1459 1376 1526 1544 1632 1519 1666 1548 1623 1569 1519 1588 1674 1610 ]
C [ 1615 1617 1703 1685 1640 1735 1783 1713 1688 1618 1680 1813 1566 1561 1504 1516 2326 2860 3356 138 4864 4 7 6419 6420 1576 4364 546 365 737 2109 1946 1733 1620 1489 1675 1740 1750 1746 1653 1555 1541 1526 1571 1672 1681 1633 1671 1632 1536 ]
G [ 1339 1343 1317 1307 1268 1296 1219 1190 1259 1347 1379 1264 1131 1331 1333 1184 1099 678 385 872 1225 2 1 0 0 86 948 85 156 246 555 898 1330 1271 1214 1148 1121 1127 1260 1315 1419 1333 1271 1316 1256 1211 1261 1199 1243 1331 ]
T [ 1841 1960 1846 1841 1830 1771 1858 1880 1929 1909 1845 1705 1797 1771 2130 2264 1567 2176 1712 410 295 6328 6426 16 13 4708 994 4649 5462 5000 3291 2522 2001 2043 2151 2053 2115 2182 1903 1923 1829 2042 1972 2000 1884 1974 2022 1977 1886 1958 ]

Hypothetical CWM

A [ -0.00 -0.00 0.00 -0.00 -0.00 0.02 -0.01 0.01 -0.01 -0.02 -0.02 -0.01 -0.01 0.00 -0.00 -0.00 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 0.01 0.01 0.02 -0.01 0.02 -0.02 -0.01 0.04 0.04 0.01 0.02 -0.00 -0.00 -0.00 0.01 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 -0.00 0.01 0.02 -0.02 -0.03 -0.02 -0.01 0.02 0.01 -0.01 -0.01 -0.01 -0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.01 -0.00 0.01 0.00 -0.01 -0.00 0.03 0.04 0.01 0.01 0.01 0.00 0.01 0.02 0.01 0.01 0.00 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 7231

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 6937

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 6601

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 4823

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 4612

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1403

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 588

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 453

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 322

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 116

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 44

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 30

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 26

2 profiles found for the same TF (IKZF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001086.1 IKZF1 ENCSR000EUJ GM12878 Homo sapiens MA1508.2
BP001087.1 IKZF1 ENCSR441VHN GM12878 Homo sapiens MA1508.2
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