Detailed information of deep learning profile BP001086.1

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This page shows detailed deep learning-derived predictions and motifs for IKZF1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: IKZF1
Model ID: BP001086.1
Cell line/tissue: GM12878
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
JASPAR ID: MA1508.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13422  
Source: ENCSR000EUJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 -0.00 -0.00 0.02 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00 ]
C [ 0.00 -0.00 0.00 0.00 0.01 -0.00 0.02 0.00 0.00 0.03 0.04 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.03 0.04 0.00 -0.00 0.01 -0.00 0.01 0.01 0.01 0.00 0.00 ]

Frequency matrix

       
A [ 318 313 311 320 316 324 300 326 328 342 319 309 323 337 347 386 367 308 316 342 108 84 1199 1 113 0 0 0 12 25 136 102 140 126 241 286 348 282 316 284 301 318 318 285 330 303 308 334 323 305 ]
C [ 325 351 333 337 308 336 336 339 363 365 355 329 374 329 368 349 366 323 237 524 619 1010 2 1040 0 0 1294 1289 194 625 225 236 251 430 354 320 342 368 337 351 364 351 331 340 331 345 336 344 343 344 ]
G [ 276 298 292 292 305 279 260 266 285 241 273 257 245 286 261 220 243 223 204 197 98 71 73 152 0 0 0 0 65 432 21 110 114 226 259 310 263 241 256 273 240 264 259 301 262 274 271 240 245 260 ]
T [ 377 334 360 347 367 357 400 365 320 348 349 401 354 344 320 341 320 442 539 233 471 131 22 103 1183 1296 2 7 1025 214 914 848 791 514 442 380 343 405 387 388 391 363 388 370 373 374 381 378 385 387 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.00 -0.01 -0.01 0.02 -0.02 0.01 -0.01 -0.03 -0.02 -0.02 -0.01 0.00 -0.00 -0.00 -0.01 -0.00 ]
C [ 0.00 -0.01 0.00 0.01 0.02 -0.02 0.02 -0.03 -0.00 0.03 0.04 0.00 0.01 0.00 0.00 0.00 0.01 0.00 ]
G [ 0.00 -0.01 -0.01 -0.00 -0.00 0.01 0.01 -0.03 -0.04 -0.02 -0.01 0.02 0.01 -0.02 -0.01 -0.01 -0.00 0.00 ]
T [ 0.00 0.01 0.00 0.01 -0.00 -0.01 -0.00 0.03 0.04 0.01 -0.00 0.01 -0.00 0.02 0.01 0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 2113

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2013

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1458

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1278

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 437

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 357

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 20

CWM

PFM

     

HCWM

2 profiles found for the same TF (IKZF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001087.1 IKZF1 ENCSR441VHN GM12878 Homo sapiens MA1508.2
BP001088.1 IKZF1 ENCSR874AFU GM12878 Homo sapiens MA1508.2
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