Detailed information of deep learning profile BP001087.1

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This page shows detailed deep learning-derived predictions and motifs for IKZF1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: IKZF1
Model ID: BP001087.1
Cell line/tissue: GM12878
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
JASPAR ID: MA1508.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13422  
Source: ENCSR441VHN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.01 0.01 0.01 -0.00 0.00 0.00 0.00 0.03 0.02 -0.00 -0.00 -0.00 0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.03 0.03 0.00 0.00 0.01 -0.00 0.01 0.00 0.00 0.00 ]
T [ 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.01 -0.00 -0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 1539 1549 1470 1523 1540 1551 1422 1441 1437 1570 1526 1624 1624 1472 1457 1902 2295 3684 4127 3745 813 3660 37 14 5139 5077 299 262 1307 1692 1202 1787 1624 1319 1379 1384 1456 1503 1443 1507 1448 1377 1489 1460 1436 1540 1428 1366 1465 1441 ]
C [ 1062 1019 1071 1082 1112 1126 1183 1114 1094 961 981 1010 1058 1093 1150 795 597 297 254 99 965 170 0 0 1 0 801 599 326 645 981 942 1174 1195 966 1068 1126 1100 1076 1037 1050 1120 1006 1114 1147 1141 1138 1102 1115 1135 ]
G [ 1320 1311 1296 1283 1227 1239 1256 1309 1394 1402 1480 1336 1203 1316 1304 1509 1805 743 398 537 3239 1259 5102 5126 0 0 4006 104 2730 2270 1842 1179 1228 1175 1261 1406 1342 1282 1348 1335 1417 1361 1327 1336 1286 1261 1279 1342 1322 1262 ]
T [ 1219 1261 1303 1252 1261 1224 1279 1276 1215 1207 1153 1170 1255 1259 1229 934 443 416 361 759 123 51 1 0 0 63 34 4175 777 533 1115 1232 1114 1451 1534 1282 1216 1255 1273 1261 1225 1282 1318 1230 1271 1198 1295 1330 1238 1302 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 0.01 0.01 0.01 -0.00 0.00 0.00 0.00 0.03 0.02 0.00 -0.01 -0.00 0.00 -0.00 0.00 ]
C [ 0.00 0.00 -0.00 -0.01 -0.01 -0.00 0.01 0.01 -0.00 -0.01 -0.01 -0.01 0.01 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 -0.00 -0.00 0.01 0.01 0.03 0.03 -0.00 -0.02 0.02 -0.01 0.01 0.01 0.01 0.00 ]
T [ -0.00 -0.00 -0.01 -0.00 -0.00 0.00 -0.01 -0.01 -0.02 -0.02 -0.01 0.00 -0.01 0.02 -0.00 -0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 7359

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5654

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 4988

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 4760

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 3615

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 1177

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 783

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 779

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 600

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 575

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 474

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 33

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 31

CWM

PFM

     

HCWM

2 profiles found for the same TF (IKZF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001086.1 IKZF1 ENCSR000EUJ GM12878 Homo sapiens MA1508.2
BP001088.1 IKZF1 ENCSR874AFU GM12878 Homo sapiens MA1508.2
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