Detailed information of deep learning profile BP001088.1

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This page shows detailed deep learning-derived predictions and motifs for IKZF1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: IKZF1
Model ID: BP001088.1
Cell line/tissue: GM12878
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
JASPAR ID: MA1508.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13422  
Source: ENCSR874AFU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 0.01 0.02 0.01 -0.00 0.00 0.00 0.00 0.04 0.03 -0.00 -0.00 0.00 0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.01 0.00 0.04 0.04 0.00 0.00 0.02 -0.00 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.02 -0.00 -0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 1958 1886 1977 2022 1974 1884 2000 1972 2042 1829 1923 1903 2182 2115 2053 2151 2043 2001 2522 3291 5000 5462 4649 994 4708 13 16 6426 6328 295 410 1712 2176 1567 2264 2130 1771 1797 1705 1845 1909 1929 1880 1858 1771 1830 1841 1846 1960 1841 ]
C [ 1331 1243 1199 1261 1211 1256 1316 1271 1333 1419 1315 1260 1127 1121 1148 1214 1271 1330 898 555 246 156 85 948 86 0 0 1 2 1225 872 385 678 1099 1184 1333 1331 1131 1264 1379 1347 1259 1190 1219 1296 1268 1307 1317 1343 1339 ]
G [ 1536 1632 1671 1633 1681 1672 1571 1526 1541 1555 1653 1746 1750 1740 1675 1489 1620 1733 1946 2109 737 365 546 4364 1576 6420 6419 7 4 4864 138 3356 2860 2326 1516 1504 1561 1566 1813 1680 1618 1688 1713 1783 1735 1640 1685 1703 1617 1615 ]
T [ 1610 1674 1588 1519 1569 1623 1548 1666 1519 1632 1544 1526 1376 1459 1559 1581 1501 1371 1069 480 452 452 1155 129 65 2 0 1 101 51 5015 982 721 1443 1471 1468 1772 1941 1653 1531 1561 1559 1652 1575 1633 1697 1602 1569 1515 1640 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.00 0.00 0.01 0.01 0.02 0.01 0.00 0.01 0.01 0.01 0.04 0.03 -0.00 -0.01 0.00 0.01 -0.00 0.01 0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 -0.01 -0.01 -0.01 0.01 0.02 -0.01 -0.02 -0.03 -0.02 0.02 0.01 -0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.01 -0.00 -0.00 -0.00 0.02 0.01 0.04 0.04 -0.01 -0.02 0.02 -0.01 0.02 0.01 0.01 -0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.01 -0.00 -0.00 0.00 -0.01 -0.01 -0.02 -0.02 -0.01 0.01 -0.01 0.02 -0.00 -0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 7231

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 6937

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 6601

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 4823

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 4612

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1403

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 588

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 453

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 322

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 116

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 44

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 30

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 26

CWM

PFM

     

HCWM

2 profiles found for the same TF (IKZF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001086.1 IKZF1 ENCSR000EUJ GM12878 Homo sapiens MA1508.2
BP001087.1 IKZF1 ENCSR441VHN GM12878 Homo sapiens MA1508.2
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