Detailed information of deep learning profile BP001087.1

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This page shows detailed deep learning-derived predictions and motifs for IKZF1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: IKZF1
Model ID: BP001087.1
Cell line/tissue: GM12878
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
JASPAR ID: MA1508.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13422  
Source: ENCSR441VHN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 -0.00 -0.00 0.01 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.00 0.01 -0.00 0.01 0.00 0.00 0.03 0.03 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.02 0.03 0.00 0.00 0.00 -0.00 0.01 0.01 0.01 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1302 1238 1330 1295 1198 1271 1230 1318 1282 1225 1261 1273 1255 1216 1282 1534 1451 1114 1232 1115 533 777 4175 34 63 0 0 1 51 123 759 361 416 443 934 1229 1259 1255 1170 1153 1207 1215 1276 1279 1224 1261 1252 1303 1261 1219 ]
C [ 1262 1322 1342 1279 1261 1286 1336 1327 1361 1417 1335 1348 1282 1342 1406 1261 1175 1228 1179 1842 2270 2730 104 4006 0 0 5126 5102 1259 3239 537 398 743 1805 1509 1304 1316 1203 1336 1480 1402 1394 1309 1256 1239 1227 1283 1296 1311 1320 ]
G [ 1135 1115 1102 1138 1141 1147 1114 1006 1120 1050 1037 1076 1100 1126 1068 966 1195 1174 942 981 645 326 599 801 0 1 0 0 170 965 99 254 297 597 795 1150 1093 1058 1010 981 961 1094 1114 1183 1126 1112 1082 1071 1019 1062 ]
T [ 1441 1465 1366 1428 1540 1436 1460 1489 1377 1448 1507 1443 1503 1456 1384 1379 1319 1624 1787 1202 1692 1307 262 299 5077 5139 14 37 3660 813 3745 4127 3684 2295 1902 1457 1472 1624 1624 1526 1570 1437 1441 1422 1551 1540 1523 1470 1549 1539 ]

Hypothetical CWM

   
A [ -0.00 0.00 -0.00 -0.00 0.02 -0.01 0.00 -0.01 -0.02 -0.02 -0.01 -0.01 0.00 -0.00 -0.00 -0.01 -0.00 -0.00 ]
C [ 0.00 0.01 0.01 0.01 -0.01 0.02 -0.02 -0.00 0.03 0.03 0.01 0.01 -0.00 -0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 0.01 -0.01 -0.01 -0.01 -0.00 0.01 0.01 -0.00 -0.01 -0.01 -0.00 0.00 0.00 ]
T [ 0.00 -0.00 0.00 -0.00 -0.01 0.00 0.02 0.03 0.00 0.00 0.00 -0.00 0.01 0.01 0.01 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 7359

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5654

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 4988

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 4760

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 3615

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 1177

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 783

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 779

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 600

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 575

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 474

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 33

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 31

CWM

PFM

     

HCWM

2 profiles found for the same TF (IKZF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001086.1 IKZF1 ENCSR000EUJ GM12878 Homo sapiens MA1508.2
BP001088.1 IKZF1 ENCSR874AFU GM12878 Homo sapiens MA1508.2
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